Timmy Huang
7c7203bdfe
chore: replace deprecated codecov with GitHub Action ( #2747 )
...
Migrate from the deprecated codecov npm package and bash uploader to the
official codecov/codecov-action@v5. This fixes gcov errors on macOS runners
and provides better reliability for coverage uploads.
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com >
2026-01-16 09:28:12 -08:00
Ronen
fd8b47b78e
chore: Release 1.3.0 ( #2700 )
...
* Bump version: 1.2.0 → 1.3.0-rc.0
* Bump version: 1.3.0-rc.0 → 1.3.0
2024-09-12 16:05:14 -04:00
Ronen
eb743efd9a
fix: webpack upgrade ( #2691 )
2024-09-09 13:34:44 -04:00
Ronen
67d152e108
fix: mlflow critical upgrade ( #2690 )
2024-09-09 12:29:09 -04:00
Timmy Huang
7bf5add6ef
chore: Fix compatibility tests ( #2685 )
...
* chore: Fix compatibility tests
* DEBUGGGG
* fix: update deps, fix unit tests
* fix: FE deps
* chore: update compatibility matrix
---------
Co-authored-by: kaloster <rkalo@contractor.chanzuckerberg.com >
2024-09-05 09:26:40 -07:00
dependabot[bot]
4281a8f816
chore(deps-dev): bump follow-redirects from 1.15.1 to 1.15.6 in /client ( #2661 )
...
Bumps [follow-redirects](https://github.com/follow-redirects/follow-redirects ) from 1.15.1 to 1.15.6.
- [Release notes](https://github.com/follow-redirects/follow-redirects/releases )
- [Commits](https://github.com/follow-redirects/follow-redirects/compare/v1.15.1...v1.15.6 )
---
updated-dependencies:
- dependency-name: follow-redirects
dependency-type: indirect
...
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com >
2024-04-18 14:54:49 +00:00
Severiano Badajoz
4bb9a2b834
chore: update dependencies ( #2636 )
...
* chore: update dependencies
* fix babel plugins and lint errors
* switch out obselete browser plugin
* add babel config for jest
* revert some babel/jest package bumps
* npm install
* tmp remove werkzeug pin
---------
Co-authored-by: Seve Badajoz <severiano.badajoz@chanzuckerberg.com >
2023-10-20 21:08:09 -04:00
atarashansky
ffcf6eb5d8
chore: Release version 1.1.2 ( #2611 )
...
* Bump version: 1.1.1 → 1.1.2-rc.0
* fix: release candidate 1.1.2
* Bump version: 1.1.2-rc.0 → 1.1.2
* promote
---------
Co-authored-by: atarashansky <atarashansky@CZIMACOS3990.hsd1.ma.comcast.net >
2023-04-26 15:01:57 -04:00
Andrew Tolopko
f48d06fb90
Bump version: 1.1.0 → 1.1.1 ( #2572 )
2022-09-21 15:33:28 -04:00
Andrew Tolopko
a9044b01df
release version 1.1.0 ( #2548 )
...
* Bump version: 1.0.1 → 1.1.0-rc.0
* bump version to v1.1.0
* Bump version: 1.1.0-rc.0 → 1.1.0-rc.1
* bump version to v1.1.0 rc1
rc0 was previously used by an aborted release attempt
* Bump version: 1.1.0-rc.1 → 1.1.0
Co-authored-by: Seve Badajoz <severiano.badajoz@chanzuckerberg.com >
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
2022-08-23 10:02:23 -07:00
Severiano Badajoz
d753441acc
chore(webpack): remove script-ext-html-webpack-plugin ( #2534 )
...
Co-authored-by: Seve Badajoz <severiano.badajoz@chanzuckerberg.com >
2022-07-12 13:42:20 -04:00
Rohan Agarwal
8b4c1e418e
chore: replace optimize-css-assets-webpack-plugin with css-minimizer-webpack-plugin ( #2525 )
...
* Replace optimize-css-assets-webpack-plugin with css-minimizer-webpack-plugin
* Fix lint issues in JS
* remove favicons
* update snapshots
* update annotations snapshots
Co-authored-by: Trent Smith <1429913+Bento007@users.noreply.github.com >
Co-authored-by: Seve Badajoz <sbadajoz@chanzuckerberg.com >
2022-06-07 13:13:17 -07:00
Severiano Badajoz
002c9a5c7f
release version 1.0.1 ( #2497 )
...
* Bump version: 1.0.0 → 1.0.1-rc.0
* Bump version: 1.0.1-rc.0 → 1.0.1
2022-02-28 15:18:21 -08:00
dependabot[bot]
e6a0351079
chore(deps): bump nanoid from 3.1.25 to 3.3.1 in /client ( #2488 )
...
Bumps [nanoid](https://github.com/ai/nanoid ) from 3.1.25 to 3.3.1.
- [Release notes](https://github.com/ai/nanoid/releases )
- [Changelog](https://github.com/ai/nanoid/blob/main/CHANGELOG.md )
- [Commits](https://github.com/ai/nanoid/compare/3.1.25...3.3.1 )
---
updated-dependencies:
- dependency-name: nanoid
dependency-type: indirect
...
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-25 09:57:22 -08:00
dependabot[bot]
38fdc649f5
chore(deps): bump axios from 0.21.1 to 0.21.4 in /client ( #2491 )
...
Bumps [axios](https://github.com/axios/axios ) from 0.21.1 to 0.21.4.
- [Release notes](https://github.com/axios/axios/releases )
- [Changelog](https://github.com/axios/axios/blob/master/CHANGELOG.md )
- [Commits](https://github.com/axios/axios/compare/v0.21.1...v0.21.4 )
---
updated-dependencies:
- dependency-name: axios
dependency-type: indirect
...
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-24 14:20:17 -08:00
dependabot[bot]
69a5d5e837
chore(deps): bump tmpl from 1.0.4 to 1.0.5 in /client ( #2490 )
...
Bumps [tmpl](https://github.com/daaku/nodejs-tmpl ) from 1.0.4 to 1.0.5.
- [Release notes](https://github.com/daaku/nodejs-tmpl/releases )
- [Commits](https://github.com/daaku/nodejs-tmpl/commits/v1.0.5 )
---
updated-dependencies:
- dependency-name: tmpl
dependency-type: indirect
...
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-24 14:05:26 -08:00
dependabot[bot]
b854c58eea
chore(deps): bump simple-get from 3.1.0 to 3.1.1 in /client ( #2489 )
...
Bumps [simple-get](https://github.com/feross/simple-get ) from 3.1.0 to 3.1.1.
- [Release notes](https://github.com/feross/simple-get/releases )
- [Commits](https://github.com/feross/simple-get/compare/v3.1.0...v3.1.1 )
---
updated-dependencies:
- dependency-name: simple-get
dependency-type: indirect
...
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-24 13:46:07 -08:00
dependabot[bot]
2d650ba50d
chore(deps): bump follow-redirects from 1.14.2 to 1.14.8 in /client ( #2484 )
...
Bumps [follow-redirects](https://github.com/follow-redirects/follow-redirects ) from 1.14.2 to 1.14.8.
- [Release notes](https://github.com/follow-redirects/follow-redirects/releases )
- [Commits](https://github.com/follow-redirects/follow-redirects/compare/v1.14.2...v1.14.8 )
---
updated-dependencies:
- dependency-name: follow-redirects
dependency-type: indirect
...
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-02-24 11:57:08 -08:00
Severiano Badajoz
853976b716
release version 1.0.0 ( #2466 )
...
* Bump version: 0.19.0 → 1.0.0-rc.0
* Bump version: 1.0.0-rc.0 → 1.0.0
2021-11-02 14:53:26 -07:00
Ben MR
f4986c9c7d
Release version 0.19.0 ( #2444 )
...
* Bump version: 0.18.0 → 0.19.0-rc.0
* release can 0.19.0
* Bump version: 0.19.0-rc.0 → 0.19.0-rc.1
* bump rc
* Bump version: 0.19.0-rc.1 → 0.19.0
* release final
2021-09-28 11:10:24 -07:00
Severiano Badajoz
5eb0ecc997
chore: update frontend packages ( #2442 )
...
* run audit
* migrate husky
2021-09-22 10:22:44 -07:00
Severiano Badajoz
01013bcf04
refactor: drop non-session auth from frontend ( #2419 )
2021-09-14 15:55:46 -07:00
Severiano Badajoz
2715dba703
fix: update/remove deprecated packages ( #2411 )
...
* replace deprecated packages
* more updates
2021-08-26 15:18:43 -07:00
Bruce Martin
eaae6df5e3
TS Revert (1) ( #2402 )
...
* revert all commits to before Typescript migration
* update compat workflow to match latest deps (#2335 )
* update compat workflow to match latest deps
* attempt to debug
* attempt to debug
* remove debugging code
* typo
* update deps to match desktop (#2340 )
* fix: don't run lint with `--fix` on push tests (#2273 )
* fix: don't run lint with `--fix` on push tests
* npx
Co-authored-by: maniarathi <mani.arathi@gmail.com >
Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com >
* rename X_approx_distribution to X_approximate_distribution (#2337 )
* Correctly handle non-finite numbers in heuristic determination of X distribution (#2342 )
* handle non-finites explicitly
* improve and test edge case handling for distribution estimation
* revert debugging changes
* code readability
* clean up type inferencing (#2332 )
* unit tests for 64 bit conversion
* clean up type handling
* type inference tests
* more type inference fixes
* use schema to determine user intent for data typing
* stop using deprecated API
* fbs type encoding test
* add missing test
* add more tests
* correctly infer X type for CXG adaptor
* lint
* fix typo
* ts migration
* cleanup from PR review
* lint
* PR review changes
* remove unused packages from client (#2359 )
* remove unused packages from client
* add missing peer dep
* fix: disable FE auth testing on compatibility tests (#2377 )
* update: release process (#2277 )
Co-authored-by: maniarathi <mani.arathi@gmail.com >
* fix: remove spaces in param setup (#2380 )
* delete deploy workflow (#2396 )
* undo reformatting which now does not pass lint
* fix snapshots which changed due to npm dep changes
* add missing quoting to snapshot
* another snapshot typo fix
* TS Revert (2) - replay PR #2347 and #2354 (#2403 )
* replay edits from PR 2347
* TS Revert (3) - replay edits in PR #2327 (#2404 )
* replay edits in PR 2327
* TS Revert (4) - replay PR #2355 (#2405 )
* replay edits in PR 2355
* add additional babel config
* reformat with new prettier config
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
Co-authored-by: maniarathi <mani.arathi@gmail.com >
Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com >
2021-08-23 15:01:36 -07:00
Bruce Martin
03bb904f24
remove unused packages from client ( #2359 )
...
* remove unused packages from client
* add missing peer dep
2021-07-30 20:00:00 -07:00
Timmy Huang
5ab96ed360
disable formatting rules for eslint and add prettier in lint-staged ( #2355 )
...
* disable formatting rules for eslint and add prettier in lint-staged
* update npm modules
* set plugin-proposal-private-methods to loose
* update snapshots due to popover package update
* add missing quotes
Co-authored-by: bkmartinjr <bruce@chanzuckerberg.com >
2021-07-30 12:27:47 -07:00
Mim Hastie
934cc5c69b
TS migration. #2288 . ( #2328 )
...
* Added TS. Updated build and linting config. Added types.
* [ts-migrate][.] Rename files from JS/JSX to TS/TSX
Co-authored-by: ts-migrate <>
* [ts-migrate][.] Run TS Migrate
Co-authored-by: ts-migrate <>
* Corrected files mangled by ts-migrate.
* Updated lint config, minor linting.
* Re-enabled Husky.
* Updated tests and config.
* Reverted webpack devtool config.
* Removed obsolete snapshots.
* Added annotations snap.
* Updated tsconfig includes wrt linting.
* Removed ts-migrate.
Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com >
2021-07-26 20:18:17 +00:00
Severiano Badajoz
07816c2f93
docs: release 0.17.0 ( #2278 )
...
* Bump version: 0.16.7 → 0.17.0-rc.0
* Bump version: 0.17.0-rc.0 → 0.17.0
2021-07-07 15:07:37 -07:00
signechambers1
56fcbae672
Remove safari from supported browsers ( #2272 )
...
* Update README.md
* Update package.json
* Update obsoleteHTMLTemplate.html
* remove unneeded polyfills
* explicit deny safari
* remove from webpack and update lock
Co-authored-by: Seve Badajoz <sbadajoz@chanzuckerberg.com >
2021-07-06 10:09:51 -10:00
Severiano Badajoz
a4050f10e1
feat(geneset): save diff exp result as geneset ( #2216 )
...
* update package lock
* allow falsey vals
* remove old diff exp handling
* save diff exp results as geneset
* delete test
* check for undefined or null
* use global geneset description for diffexp
* remove diffexp special code, no longer showing adjpval + logfoldchange
* remove differential map to state
* remove clear from FSM, since we no longer support those actions
* restore controlHelpers test with todo
2021-05-25 10:51:31 -07:00
Bruce Martin
99a795a688
Updating front-end dependencies ( #2167 )
...
* update to webpack 5
* update babel
* update eslint
* update cheerio
* update npm min to v7
* revert engine change
* generate package lock with npm v6 (lockfileVersion 1)
* add region to test setup
* update blueprint popover2
* tabindex changes due to blueprint popover2 revision
* update snapshots
* update lodash and pako
* fix typo
* fix lodash refactoring
* more lodash refactoring
* update babel and blueprintjs
* update jest support packages
* update puppeteer
* update regl
* update react-icons and react-helmet
* update react and react-dom
2021-04-21 07:23:31 -07:00
Severiano Badajoz
f36d889455
fix: explicitly depend on favicons ( #2143 )
2021-04-08 15:55:00 -07:00
Severiano Badajoz
4510c8c8a4
Fetch passwords from secretsmanager ( #2138 )
...
* add aws secretsmanagerclient
* create custom globalsetup
* consume secret password and enable tests
* update npm
2021-04-05 14:16:10 -07:00
Bruce Martin
ae30b66123
gene set summary progress ( #2127 )
...
* revert removal of cache control headers
* checkpoint work on revising summary route
* add summary query support to annoMatrix
* summarize route cleanup
* add mising file
* clean up summarize route
* add summary histogram
* update deps
* lint
* more lint
* lint
* manage crossfiler during gene set state changes
* remove obsolete debugging code
* correctly perform async watch in histogram
* better error handling
2021-03-30 14:43:53 -07:00
Colin Megill
e6e358ddc8
Gene sets UI, right sidebar refactor ( #2097 )
...
* prototyping
* render histos on open gene set
* prototyping
* render histos on open gene set
* factor out add genes to own component
* remove unused import
* mock reducer
* color by geneset stub
* menus and buttons
* geneset dialogue stub
* remove heatmap mock
* componetize histogram
* reenable add genes
* re-add isuserdefined
* test data
* remove have fetched
* add isExpanded state to gene, and pass to histogram
* expand button
* toggleable
* mini
* bump number of genes to 50
* don't clear diffexp on subset
* move create category to top
* render diffexp as geneset
* geneset show mean expression
* gene set reducer
* add geneset UI reducer
* wire e2e gene set loading prototype
* fix sniffing bug
* fix typo
* add gene modals
* client/src/actions/
* add autosave
* rename data-dir cli param
* add geneset, add gene, delete set
* prototype: remove csv upload placeholder
* handle delete gene from set
* prepopulate geneset with genes from modal
* add geneset: rename action
* icons, language consistency
* chevron after
* handle empty string case on genes for create geneset
* edit geneset
* fix language on create
* copy correction
* add popper2
upgrade react popper
upgrade react popper
adding popover2 package
* truncate uses tooltip2
* gene set button text typo
* remove logging
* moving server over
* remove test imports
* don't try to destructure map, use array.from
* fix add gene map datastructure error
* Revert "fix add gene map datastructure error"
This reverts commit b0eed45952 .
* name --> genesetName, genes --> geneSymbols
* add gene to geneset, temporary format
* handle empty case, clear form input
* lint -- genesets wasn't passed via props
* userinfo
* move genes string to object conversion to action
* remove tmp gene description
* emptystring default for description
* remove empty string
* remove top level package json
* remove package lock as well
* remove flag for feature toggle
* remove comments in geneset
* comment cleanup
* remove comment
* revert diffexp genes to 10
* color by gene set
* disable color by gene set
* Gene menus are now inline, remove dead prototype code
* remove todo, magic number to variable
* remove jshint in rightsidebar
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
* remove unused geneset validation code
* tmp format pending geneset description
* move magic number into variable
* reorganize genesetsUI reducer pending tests
* rewire edit given new action name
* add basic validation and feedback for geneset name uniqueness
* mv annoDialog
* mv label, repair paths
* Update client/src/components/brushableHistogram/header.js
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
* add imports for icon in histo
* update jest snapshots given blueprint/tooltip2 usage of index -1
* ensure no empty paragraph
* intent from blueprint
* remove remainder of jshint references
* do not push undo when autosave fires
* fix autosave bugs
* remove todos
* clamp to util
* scient to util
* revert clearing diffexp
* rename value to be more specific stacked bar
* clean up logging and commetns
* remove gene entry tests pending rewrite
* tab index -1
* update jest snapshot, blueprint tooltip 2
* caret margin
* snapshot update
* ensure histogram is centered
* add geneset actions to config
* comment maybeScientific
* comment clamp
* comment ui reducer
* remove prototype code
* remove error log
* remove references to bl.ocks
* componetize parseBulkGeneString
* catch case where geneset rename same name
* genesetui reducer tests
* add geneset ui to index reducer config
Co-authored-by: bkmartinjr <bruce@chanzuckerberg.com >
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
2021-03-24 16:33:26 -04:00
maniarathi
b3aadf6632
Release version 0.16.7 ( #2081 )
2021-02-27 22:10:53 -08:00
dependabot[bot]
db559467a2
Bump ini from 1.3.5 to 1.3.7 in /client ( #2000 )
...
Bumps [ini](https://github.com/isaacs/ini ) from 1.3.5 to 1.3.7.
<details>
<summary>Commits</summary>
<ul>
<li><a href="c74c8af35f "><code>c74c8af</code></a> 1.3.7</li>
<li><a href="024b8b55ac "><code>024b8b5</code></a> update deps, add linting</li>
<li><a href="032fbaf5f0 "><code>032fbaf</code></a> Use Object.create(null) to avoid default object property hazards</li>
<li><a href="2da90391ef "><code>2da9039</code></a> 1.3.6</li>
<li><a href="cfea636f53 "><code>cfea636</code></a> better git push script, before publish instead of after</li>
<li><a href="56d2805e07 "><code>56d2805</code></a> do not allow invalid hazardous string as section name</li>
<li>See full diff in <a href="https://github.com/isaacs/ini/compare/v1.3.5...v1.3.7 ">compare view</a></li>
</ul>
</details>
<details>
<summary>Maintainer changes</summary>
<p>This version was pushed to npm by <a href="https://www.npmjs.com/~isaacs ">isaacs</a>, a new releaser for ini since your current version.</p>
</details>
<br />
[](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores )
Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting `@dependabot rebase`.
[//]: # (dependabot-automerge-start)
[//]: # (dependabot-automerge-end)
---
<details>
<summary>Dependabot commands and options</summary>
<br />
You can trigger Dependabot actions by commenting on this PR:
- `@dependabot rebase` will rebase this PR
- `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it
- `@dependabot merge` will merge this PR after your CI passes on it
- `@dependabot squash and merge` will squash and merge this PR after your CI passes on it
- `@dependabot cancel merge` will cancel a previously requested merge and block automerging
- `@dependabot reopen` will reopen this PR if it is closed
- `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
- `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
- `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
- `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
- `@dependabot use these labels` will set the current labels as the default for future PRs for this repo and language
- `@dependabot use these reviewers` will set the current reviewers as the default for future PRs for this repo and language
- `@dependabot use these assignees` will set the current assignees as the default for future PRs for this repo and language
- `@dependabot use this milestone` will set the current milestone as the default for future PRs for this repo and language
You can disable automated security fix PRs for this repo from the [Security Alerts page](https://github.com/chanzuckerberg/cellxgene/network/alerts ).
</details>
2021-01-04 17:14:45 -08:00
dependabot[bot]
96362b0b98
Bump urijs from 1.19.2 to 1.19.5 in /client ( #2012 )
...
Bumps [urijs](https://github.com/medialize/URI.js ) from 1.19.2 to 1.19.5.
- [Release notes](https://github.com/medialize/URI.js/releases )
- [Changelog](https://github.com/medialize/URI.js/blob/gh-pages/CHANGELOG.md )
- [Commits](https://github.com/medialize/URI.js/compare/v1.19.2...v1.19.5 )
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-01-04 16:45:23 -08:00
Timmy Huang
2cf55ab819
thuang-compress-annotation ( #1980 )
...
* thuang-compress-annotation
* compress test
* use zlib.decompress directly
2020-11-17 14:05:07 -08:00
dependabot[bot]
85fc000418
Bump dot-prop from 4.2.0 to 4.2.1 in /client ( #1954 )
...
Bumps [dot-prop](https://github.com/sindresorhus/dot-prop ) from 4.2.0 to 4.2.1.
- [Release notes](https://github.com/sindresorhus/dot-prop/releases )
- [Commits](https://github.com/sindresorhus/dot-prop/compare/v4.2.0...v4.2.1 )
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
2020-11-09 22:05:34 -08:00
dependabot[bot]
e6c996ca93
Bump bl from 4.0.2 to 4.0.3 in /client ( #1810 )
...
Bumps [bl](https://github.com/rvagg/bl ) from 4.0.2 to 4.0.3.
- [Release notes](https://github.com/rvagg/bl/releases )
- [Commits](https://github.com/rvagg/bl/compare/v4.0.2...v4.0.3 )
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
2020-09-30 15:24:51 -07:00
Severiano Badajoz
7bee09cd16
Add blueprint eslint plugin ( #1892 )
...
* add bp3 eslint plugin
* first eslint runthrough + manual changes
* small fixes
* update snapshots
* update h1 to h4
Co-authored-by: czimergebot <35308261+czimergebot@users.noreply.github.com >
2020-09-29 15:00:56 -07:00
Snyk bot
fae9ac9382
Upgrade lodash from 4.17.15 to 4.17.20 ( #1759 )
...
<h3>Snyk has created this PR to fix one or more vulnerable packages in the `npm` dependencies of this project.</h3>

#### Changes included in this PR
- Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
- client/package.json
- client/package-lock.json
#### Vulnerabilities that will be fixed
##### With an upgrade:
Severity | Priority Score (*) | Issue | Breaking Change | Exploit Maturity
:-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------
 | **776/1000** <br/> **Why?** Recently disclosed, Has a fix available, CVSS 9.8 | Prototype Pollution <br/>[SNYK-JS-LODASH-590103](https://snyk.io/vuln/SNYK-JS-LODASH-590103 ) | No | No Known Exploit
(*) Note that the real score may have changed since the PR was raised.
Check the changes in this PR to ensure they won't cause issues with your project.
------------
**Note:** *You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.*
For more information: <img src="https://api.segment.io/v1/pixel/track?data=eyJ3cml0ZUtleSI6InJyWmxZcEdHY2RyTHZsb0lYd0dUcVg4WkFRTnNCOUEwIiwiYW5vbnltb3VzSWQiOiIzMTg0Mjc0Ny03NTJmLTQyZTctYjFmMi04ZmEzZjUxZDBlMjEiLCJldmVudCI6IlBSIHZpZXdlZCIsInByb3BlcnRpZXMiOnsicHJJZCI6IjMxODQyNzQ3LTc1MmYtNDJlNy1iMWYyLThmYTNmNTFkMGUyMSJ9fQ== " width="0" height="0"/>
🧐 [View latest project report](https://app.snyk.io/org/cellxgene/project/9195ddb9-6feb-469e-ad47-f5dc24c811fe )
🛠 [Adjust project settings](https://app.snyk.io/org/cellxgene/project/9195ddb9-6feb-469e-ad47-f5dc24c811fe/settings )
📚 [Read more about Snyk's upgrade and patch logic](https://support.snyk.io/hc/en-us/articles/360003891078-Snyk-patches-to-fix-vulnerabilities )
[//]: # (snyk:metadata:{"prId":"31842747-752f-42e7-b1f2-8fa3f51d0e21","dependencies":[{"name":"lodash","from":"4.17.15","to":"4.17.20"}],"packageManager":"npm","projectPublicId":"9195ddb9-6feb-469e-ad47-f5dc24c811fe","projectUrl":"https://app.snyk.io/org/cellxgene/project/9195ddb9-6feb-469e-ad47-f5dc24c811fe?utm_source=github&utm_medium=fix-pr ","type":"auto","patch":[],"vulns":["SNYK-JS-LODASH-590103"],"upgrade":["SNYK-JS-LODASH-590103"],"isBreakingChange":false,"env":"prod","prType":"fix","templateVariants":["updated-fix-title","priorityScore","merge-advice-badge-shown"],"priorityScoreList":[776]})
2020-08-20 11:03:30 -07:00
maniarathi
263e893b30
Revert "Patching ( #1744 )" ( #1748 )
...
This reverts commit 6848f7a8b2 .
2020-08-14 11:22:39 -07:00
maniarathi
6848f7a8b2
Patching ( #1744 )
2020-08-13 14:36:42 -07:00
maniarathi
44c738e2f4
Bumping version of cellxgene for desktop release ( #1733 )
2020-08-12 09:58:52 -07:00
Severiano Badajoz
8bbc183647
Explicit Browser Support ( #1682 )
...
* add FastestSmallestTextEncoderDecoder polyfill
* remove nomodule from script import
* add browserslist
* add obsolete-webpack-plugin
* switch out modern-browser for preset-env
* add prompt on non target browser
* propagate prod changes to dev
* add core-js-3 and TextEncoder TextDecoder (#1671 )
* add script to remove react, style html
* propagate changes to prod
* add script-ext-html-webpack-plugin for async
* more styling
* add eslint-plugin-compat
* extend compat plugin
* add existing polyfills
* add github fetch polyfill
* add AbortController polyfill
* change promptOnNonTargetBrowser to false
* propagate
* add browser links
* prettier
* add browser support to readme
* move polyfills to webpack
* remove CDN encoder polyfill
* Add no Explorer support
* fix incorrect package name
* propagate changes
* Update README.md
Co-authored-by: Ambrose J Carr <ambrosejcarr@users.noreply.github.com >
* add new deps
* create shared config
* swap out html-loader for filestream
* sanitize template
Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com >
Co-authored-by: Ambrose J Carr <ambrosejcarr@users.noreply.github.com >
2020-08-03 12:50:09 -07:00
dependabot[bot]
bb2326525e
Bump elliptic from 6.5.2 to 6.5.3 in /client ( #1697 )
...
Bumps [elliptic](https://github.com/indutny/elliptic ) from 6.5.2 to 6.5.3.
- [Release notes](https://github.com/indutny/elliptic/releases )
- [Commits](https://github.com/indutny/elliptic/compare/v6.5.2...v6.5.3 )
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2020-07-31 13:54:56 -04:00
dependabot[bot]
ad1bda07e9
Bump codecov from 3.7.0 to 3.7.1 in /client ( #1654 )
...
Bumps [codecov](https://github.com/codecov/codecov-node ) from 3.7.0 to 3.7.1.
- [Release notes](https://github.com/codecov/codecov-node/releases )
- [Commits](https://github.com/codecov/codecov-node/compare/v3.7.0...v3.7.1 )
Signed-off-by: dependabot[bot] <support@github.com >
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2020-07-27 11:53:57 -04:00
Bruce Martin
7b99d1a1b8
update JS deps ( #1642 )
2020-07-17 12:38:54 -07:00