Commit Graph

  • e61a871b6a chore(deps-dev): bump svgo from 2.8.0 to 2.8.4 in /client dependabot/npm_and_yarn/client/svgo-2.8.4 dependabot[bot] 2026-09-11 11:21:44 +00:00
  • b2d1d3200d chore(deps): bump joi from 17.6.0 to 17.13.7 in /client dependabot/npm_and_yarn/client/joi-17.13.7 dependabot[bot] 2026-09-09 23:48:13 +00:00
  • e7220bb80d chore(deps): bump js-yaml from 3.14.1 to 3.15.2 in /client dependabot/npm_and_yarn/client/js-yaml-3.15.2 dependabot[bot] 2026-09-09 02:15:11 +00:00
  • 90eb165475 chore(deps): bump browserslist from 4.23.3 to 4.28.9 in /client dependabot/npm_and_yarn/client/browserslist-4.28.9 dependabot[bot] 2026-09-05 22:13:52 +00:00
  • 0b6910845e chore(deps): bump nanoid from 3.3.4 to 3.3.18 in /client dependabot/npm_and_yarn/client/nanoid-3.3.18 dependabot[bot] 2026-09-04 07:55:05 +00:00
  • 76a39fcf92 fix: correct opacity prop typo and style object in centroid labels (#2767) main LiudengZhang 2026-03-09 15:39:56 -05:00
  • 5eb3021752 fix: Handle non-categorical columns with colors + update deprecated AnnData API (#2758) rwbaber 2026-02-24 21:37:57 +00:00
  • 7c7203bdfe chore: replace deprecated codecov with GitHub Action (#2747) Timmy Huang 2026-01-16 09:28:12 -08:00
  • 5ac256fc8b fix: remove incompatible float16 fixture from general adaptor tests (#2746) rwbaber 2026-01-15 23:18:45 +00:00
  • 2b86f8e600 fix: improve anndata error msg (#2743) rwbaber 2026-01-14 17:22:22 +00:00
  • 0fddcd042a docs: Add open source required docs (#2745) Timmy Huang 2026-01-14 09:13:54 -08:00
  • 96cb19c89b chore: CCIE-4984 conform to open sourcing guidelines bot/88e3f7da32ff4d269d8486ac4f135dd1 Roy Zheng 2025-08-11 22:52:38 +00:00
  • eb1dc8944f Update README.md (#2725) Justin Kiggins 2025-05-14 12:03:19 -07:00
  • 42863afcbd chore: CCIE-4284 pin amannn/action-semantic-pull-request@v3.4.1 to latest sha rzheng/CCIE-4284-967c14 Roy Zheng 2025-03-21 12:52:09 -07:00
  • 359ca084d8 chore: CCIE-4284 pin gabrielfalcao/pyenv-action@v9 to latest sha rzheng/CCIE-4284-567768 Roy Zheng 2025-03-21 12:50:19 -07:00
  • 4feebe8a78 chore: CCIE-4284 pin github/codeql-action/autobuild@v1 to latest sha rzheng/CCIE-4284-04d904 Roy Zheng 2025-03-21 12:41:17 -07:00
  • 5b48c7aecf debug kaloster/various-fixes kaloster 2024-09-12 21:43:38 -04:00
  • ca8435de10 Merge branch 'main' into kaloster/various-fixes Ronen 2024-09-12 21:40:57 -04:00
  • 0bff55201a fix: update markdown images kaloster 2024-09-12 21:40:19 -04:00
  • 012d3b8b9e flakey test kaloster/flakey-tests kaloster 2024-09-12 21:02:42 -04:00
  • 151c28d119 chore: Add ESLint no-floating-promise thuang-add-eslint-no-floating-promise Timmy Huang 2024-09-12 13:36:26 -07:00
  • fd8b47b78e chore: Release 1.3.0 (#2700) 1.3.0 Ronen 2024-09-12 16:05:14 -04:00
  • 487bd13ff8 chore: add support for python 3.12 (#2694) Ronen 2024-09-12 14:16:46 -04:00
  • ea13d3e253 debug kaloster/python-312-test kaloster 2024-09-09 16:56:25 -04:00
  • b43bce4321 debug kaloster 2024-09-09 16:53:52 -04:00
  • 8bde7c1c1f add setuptools kaloster 2024-09-09 16:51:10 -04:00
  • b11b161dd3 add setuptools kaloster 2024-09-09 16:45:58 -04:00
  • eba4c077fc add setuptools kaloster 2024-09-09 16:41:08 -04:00
  • 3e516bfb2f add setuptools kaloster 2024-09-09 16:26:47 -04:00
  • 402b9b3f94 chore: python 3.12 kaloster 2024-09-09 16:16:03 -04:00
  • eb743efd9a fix: webpack upgrade (#2691) Ronen 2024-09-09 13:34:44 -04:00
  • 67d152e108 fix: mlflow critical upgrade (#2690) Ronen 2024-09-09 12:29:09 -04:00
  • c425d2e0b0 fix: underscore snakecase notation to hyphenated snakecase for diffexp-may-be-slow (#2687) Timmy Huang 2024-09-05 10:09:13 -07:00
  • 7bf5add6ef chore: Fix compatibility tests (#2685) Timmy Huang 2024-09-05 09:26:40 -07:00
  • 4281a8f816 chore(deps-dev): bump follow-redirects from 1.15.1 to 1.15.6 in /client (#2661) dependabot[bot] 2024-04-18 14:54:49 +00:00
  • 53e9edfec1 docs: change link to the CZI science community Slack (#2662) Emanuele Bezzi 2024-03-19 10:19:28 -07:00
  • afb4ba906b server update updated-visium-beta Timmy Huang 2024-01-24 10:16:38 -08:00
  • ede95bfe4b update requirements.txt Timmy Huang 2024-01-23 10:56:56 -08:00
  • 7d61f47a31 updated visium branch Timmy Huang 2024-01-23 10:48:27 -08:00
  • 74fbec35fe chore: Release version 1.2.0 (#2652) v1.2.0 1.2.0 atarashansky 2023-12-19 14:13:08 -08:00
  • 5d4c782f3a chore: lower pinned requirements for backend server (#2651) atarashansky 2023-12-19 13:39:47 -08:00
  • 6505f6cbf5 chore: upgrade backend dependencies (#2641) atarashansky 2023-11-29 14:16:39 -08:00
  • 88c9c09ec6 chore: upgrade dependencies atar-fix-deps-2 atarashansky 2023-11-29 11:56:03 -08:00
  • 4bb9a2b834 chore: update dependencies (#2636) Severiano Badajoz 2023-10-20 18:08:09 -07:00
  • 044720e13f tech: test tests using latest installations test-pr atarashansky 2023-09-19 13:57:59 -07:00
  • 2d7aab3a9a fix: override default so that issues are not marked as stale (#2627) maniarathi 2023-08-23 21:22:17 -04:00
  • f749733d54 feat: Add a Github Action that automatically closes stale PRs. (#2626) maniarathi 2023-08-22 22:08:22 -04:00
  • ffcf6eb5d8 chore: Release version 1.1.2 (#2611) 1.1.2 atarashansky 2023-04-26 15:01:57 -04:00
  • c209a9bca7 fix: pin flask requirement to be less than 2.3 (#2609) atarashansky 2023-04-26 13:58:40 -04:00
  • aea4864e77 test atar-test atarashansky 2023-04-26 13:52:05 -04:00
  • 85319d45a4 chore: tech issue template Kuni Katsuya 2023-02-06 15:46:54 -08:00
  • 514f1627ea Update license copyright year (#2600) Andrew Tolopko 2023-02-03 16:01:53 -05:00
  • 127de34a20 feat: Add PR Linting (#2560) Severiano Badajoz 2022-10-24 20:08:25 +02:00
  • 54ab9d79b6 docs: fix test pypi install command (#2515) Andrew Tolopko 2022-09-29 15:30:11 -04:00
  • f48d06fb90 Bump version: 1.1.0 → 1.1.1 (#2572) 1.1.1 Andrew Tolopko 2022-09-21 15:33:28 -04:00
  • 84563291a0 fix: fix static file serving in webpack (#2574) Severiano Badajoz 2022-09-21 11:03:03 -07:00
  • ddb601c103 feat: annotate command improvements (#2568) Andrew Tolopko 2022-09-15 11:55:58 -04:00
  • 450261f109 chore: updating Annotate favicon and logo icon (#2556) ashin-czi 2022-08-25 12:01:03 -04:00
  • c0f4ad6dfa docs: updating readme and display version for rebranding (#2550) ashin-czi 2022-08-25 11:41:26 -04:00
  • ff5da77372 fix unit tests (#2562) atarashansky 2022-08-25 08:02:58 -07:00
  • a9044b01df release version 1.1.0 (#2548) Andrew Tolopko 2022-08-23 13:02:23 -04:00
  • 11b948369f fix: reverting back to old icon ashin-czi 2022-08-18 14:49:59 -04:00
  • a2dc0c25b1 chore: updating Annotate favicon ashin-czi 2022-08-11 13:30:19 -04:00
  • a9ef01a6f9 fix test (#2549) v1.1.0 1.1.0 Andrew Tolopko 2022-07-29 11:17:04 -04:00
  • 03d9e8e6aa fix unit test Andrew Tolopko 2022-07-29 09:57:55 -04:00
  • 30e19e47c6 feat: add cli annotation subcommand (#2539) Andrew Tolopko 2022-07-29 08:15:54 -04:00
  • d2b20129f7 use fsspec.download for S3 artifacts + additional logging (#2536) Emanuele Bezzi 2022-07-29 07:05:36 -04:00
  • 6c86216f6b Update actions/setup-python version (#2528) Rohan Agarwal 2022-07-28 14:17:46 -07:00
  • 4df50a7677 fix: s3 user annotations (#2541) Andrew Tolopko 2022-07-28 16:00:15 -04:00
  • 69a6d52240 fix embedding selection (#2543) Andrew Tolopko 2022-07-28 15:49:33 -04:00
  • 06da05eb9f skip failing tests to unblock adding of new features (#2545) Andrew Tolopko 2022-07-28 15:11:36 -04:00
  • d753441acc chore(webpack): remove script-ext-html-webpack-plugin (#2534) Severiano Badajoz 2022-07-12 10:42:20 -07:00
  • 8b4c1e418e chore: replace optimize-css-assets-webpack-plugin with css-minimizer-webpack-plugin (#2525) Rohan Agarwal 2022-06-07 13:13:17 -07:00
  • f2bd6ebce1 remove unnecessary postgres req (#2524) Madison Dunitz 2022-05-27 12:15:17 -07:00
  • de44739f8b add fsspec support to gene set and cell annotations (#2512) Bruce Martin 2022-04-20 18:18:47 -07:00
  • 002c9a5c7f release version 1.0.1 (#2497) 1.0.1 Severiano Badajoz 2022-02-28 15:18:21 -08:00
  • e6a0351079 chore(deps): bump nanoid from 3.1.25 to 3.3.1 in /client (#2488) dependabot[bot] 2022-02-25 09:57:22 -08:00
  • 38fdc649f5 chore(deps): bump axios from 0.21.1 to 0.21.4 in /client (#2491) dependabot[bot] 2022-02-24 14:20:17 -08:00
  • 69a5d5e837 chore(deps): bump tmpl from 1.0.4 to 1.0.5 in /client (#2490) dependabot[bot] 2022-02-24 14:05:26 -08:00
  • b854c58eea chore(deps): bump simple-get from 3.1.0 to 3.1.1 in /client (#2489) dependabot[bot] 2022-02-24 13:46:07 -08:00
  • 2d650ba50d chore(deps): bump follow-redirects from 1.14.2 to 1.14.8 in /client (#2484) dependabot[bot] 2022-02-24 11:57:08 -08:00
  • 8bac98f25c Fix float16 support [#2379] (#2483) Ben MR 2022-02-10 15:20:47 -08:00
  • ceb0cc6f27 Update license to 2022. (#2478) maniarathi 2022-01-14 14:07:35 -05:00
  • 11690eb745 Add README-visium visium-beta Emanuele Bezzi 2021-12-22 16:41:11 -05:00
  • eac84c5d74 Clean comments and logs Emanuele Bezzi 2021-12-21 11:33:38 -05:00
  • cbf3ba240a Put scaling back in the backend Emanuele Bezzi 2021-12-09 14:12:16 -05:00
  • 2fe9cc4aac Small fix Emanuele Bezzi 2021-12-08 17:20:06 -05:00
  • 8b07e57257 Connect button Emanuele Bezzi 2021-12-08 16:37:22 -05:00
  • f4c4ac5bda undable config and conditional graph render of image Colin Megill 2021-12-08 11:54:22 -08:00
  • febf582a0b Merge branch 'visium-beta' of github.com:chanzuckerberg/cellxgene into visium-beta Emanuele Bezzi 2021-12-07 19:42:53 -05:00
  • efe3bf7a72 Parametrization Emanuele Bezzi 2021-12-07 19:42:40 -05:00
  • b411fca5a3 auto switch spatial off Colin Megill 2021-12-07 16:32:55 -08:00
  • caa1526eb6 intent Colin Megill 2021-12-07 15:59:05 -08:00
  • 99c8f37a60 button, reducer state Colin Megill 2021-12-07 15:53:56 -08:00
  • b048bbfd0c Checkpoint Emanuele Bezzi 2021-12-06 14:57:10 -05:00
  • b1ff638879 Checkpoint Emanuele Bezzi 2021-12-05 12:58:21 -05:00
  • db0f50d011 Add frontend Emanuele Bezzi 2021-12-01 16:49:13 -05:00
  • 54d4de431c Add backend endpoint Emanuele Bezzi 2021-12-01 12:02:45 -05:00
  • 853976b716 release version 1.0.0 (#2466) 1.0.0 Severiano Badajoz 2021-11-02 14:53:26 -07:00
  • a344f292a9 Restore logo and favicon in docs/ (#2464) Emanuele Bezzi 2021-10-14 17:13:04 -04:00