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bot/88e3f7da32ff4d269d8486ac4f135dd1

colinmegill/#632

dependabot/npm_and_yarn/client/browserslist-4.28.9

dependabot/npm_and_yarn/client/joi-17.13.7

dependabot/npm_and_yarn/client/js-yaml-3.15.2

dependabot/npm_and_yarn/client/nanoid-3.3.18

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kaloster/flakey-tests

kaloster/python-312-test

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Mono Color

• face1b3033 genesets e2e tests (#2241) Colin Megill 2021-07-01 18:29:06 -07:00
• b714c18e75 feat: frontend geneset validation (#2258) Severiano Badajoz 2021-07-01 15:09:50 -07:00
• b8b1d0dd9e fix: reset gene set colorScale on gene set deletion (#2264) Severiano Badajoz 2021-06-30 16:46:44 -07:00
• 5007d307a2 Dunitz/czi hosted test server (#2254) Madison Dunitz 2021-06-30 15:07:54 -07:00
• 82de4178d9 feat: add quick gene lookup functionality (#2250) Severiano Badajoz 2021-06-23 10:59:10 -07:00
• 023ae10822 Update unit tests for CXG conversion to check for actual content rather than file names alone which have changed with the recent 0.9 release of tiledb's python package. (#2249) maniarathi 2021-06-19 09:37:05 -07:00
• 28b526b3fc feat: diffexp returns two genesets (#2230) Severiano Badajoz 2021-06-08 14:02:19 -07:00
• 7ed53c0f5b fix: add placeholder test so suite doesn't fail (#2233) Severiano Badajoz 2021-05-26 12:41:16 -07:00
• a4050f10e1 feat(geneset): save diff exp result as geneset (#2216) Severiano Badajoz 2021-05-25 10:51:31 -07:00
• 6f6634a4d9 add action to deploy on on push to canary branch (#2196) Madison Dunitz 2021-05-17 16:15:48 -07:00
• bdfd9fe0a5 Bump version: 0.16.8-rc.0 → 0.16.8 0.16.8 Arathi Mani 2021-05-13 20:31:48 -07:00
• 265ccf3682 fix: use env specific secret (#2204) Severiano Badajoz 2021-05-13 14:28:16 -07:00
• 1832c94eec Bump version: 0.16.7 → 0.16.8-rc.0 Arathi Mani 2021-05-13 08:54:23 -07:00
• 365f8a91f2 Pin versions of flatbuffer and Flask to be less than 2.0 Arathi Mani 2021-05-13 08:50:35 -07:00
• 59ec3afbb9 Pin versions of flatbuffer and Flask to be less than 2.0 (#2199) maniarathi 2021-05-12 15:13:10 -07:00
• 4666f1f044 add rule for static assest without dataset id (#2194) Madison Dunitz 2021-05-07 21:17:31 -07:00
• d04dba225f Filename dialogue includes gene sets (#2185) Colin Megill 2021-05-07 14:32:11 -07:00
• 096d8ff1d2 Geneset remove toggle (#2184) Colin Megill 2021-05-05 16:51:05 -07:00
• 25b308c532 conditional colon (#2181) Colin Megill 2021-05-04 10:43:02 -07:00
• f2e9aecebe hosted gene sets routes, plus a few bug fixes (#2155) Bruce Martin 2021-04-27 13:58:58 -07:00
• ebeb1c8818 Fix command to EB to use the artifact.zip file during deployment instead of the source code in the directory. (#2174) maniarathi 2021-04-23 11:07:57 -07:00
• b60d20eb2f Fix phony (#2173) maniarathi 2021-04-22 18:00:00 -07:00
• fd2a7a53ab Color by gene set mean expression (#2157) Colin Megill 2021-04-22 10:58:30 -07:00
• 860547ced1 update requirements for server (#2172) Bruce Martin 2021-04-21 17:12:16 -07:00
• 876ceb4d8b Create / edit geneset description (#2139) Colin Megill 2021-04-21 16:50:29 -07:00
• 99a795a688 Updating front-end dependencies (#2167) Bruce Martin 2021-04-21 07:23:31 -07:00
• e2ce9a90ca Remove updates coming from cookie banner since updates have already been executed. (#2161) maniarathi 2021-04-19 08:42:34 -07:00
• 63cf82c60e Dunitz/scale test update (#2159) Madison Dunitz 2021-04-18 13:33:04 -05:00
• c23b25d4e8 geneset description (#2141) Colin Megill 2021-04-12 13:31:21 -07:00
• f36d889455 fix: explicitly depend on favicons (#2143) Severiano Badajoz 2021-04-08 15:55:00 -07:00
• 4510c8c8a4 Fetch passwords from secretsmanager (#2138) Severiano Badajoz 2021-04-05 14:16:10 -07:00
• 6ecdfa4940 Create design_principles.md (#1903) Colin Megill 2021-04-01 16:50:09 -04:00
• b446bf7144 Handle empty gene set (#2128) Colin Megill 2021-04-01 13:45:47 -04:00
• 20bfa4cc97 prepopulate input (#2129) Colin Megill 2021-04-01 06:21:59 -04:00
• 2fa19c756c propagate diffexp state through component tree (#2135) Bruce Martin 2021-03-31 12:23:38 -07:00
• ae30b66123 gene set summary progress (#2127) Bruce Martin 2021-03-30 14:43:53 -07:00
• bfb9e1edcc increase default diffexp gene count to 50 (#2130) Bruce Martin 2021-03-30 13:10:09 -07:00
• ae23c9e5b9 white space change to run tests (#2132) Madison Dunitz 2021-03-30 14:34:39 -05:00
• b494dd31f4 revert removal of cache control headers (#2118) Bruce Martin 2021-03-26 08:49:44 -07:00
• 78c9d24ed4 Refactor czi_hosted and server into backend directory, pull common code into backend/common, refactor tests (#2102) Madison Dunitz 2021-03-26 00:27:07 -05:00
• e6e358ddc8 Gene sets UI, right sidebar refactor (#2097) Colin Megill 2021-03-24 16:33:26 -04:00
• 5335c39184 Prod (#2123) Timmy Huang 2021-03-24 10:34:36 -07:00
• a89362c1ad update gene set name validation to match latest requirements (#2117) Bruce Martin 2021-03-22 14:54:12 -07:00
• 8d932fb47d thuang-126-CZIF-policy-updates (#2111) (#2112) Timmy Huang 2021-03-17 16:07:42 -07:00
• 920d71e6b7 pin numba req (#2110) Madison Dunitz 2021-03-16 11:45:27 -05:00
• 31e0326ded gene sets summary route (#2099) Bruce Martin 2021-03-10 16:02:05 -08:00
• 1d3d9237e7 temp disable auth testing (#2092) Severiano Badajoz 2021-03-04 13:56:48 -08:00
• c037f4eaa6 rename "geneset" to "gene set" in CLI (#2088) Bruce Martin 2021-03-02 15:36:01 -08:00
• b00496198d wire up geneset reducer (#2082) Bruce Martin 2021-03-02 12:12:58 -08:00
• b3aadf6632 Release version 0.16.7 (#2081) maniarathi 2021-02-27 22:10:53 -08:00
• f3a3820ffa genesets route for local server (#2079) Bruce Martin 2021-02-26 17:53:07 -08:00
• 09466a5c32 fix: server/requirements-dev.txt to reduce vulnerabilities (#2055) maniarathi 2021-02-25 12:24:06 -08:00
• de571ce0b3 fix local_server unit-test target (#2078) Bruce Martin 2021-02-23 16:49:43 -08:00
• fb61bd6e9c Split out the local backend (#2052) Marcus Kinsella 2021-02-18 12:58:22 -08:00
• bedbc87ed6 Release 0.16.7 0.16.7 Arathi Mani 2021-02-16 09:42:01 -08:00
• 01675a9db9 Bump version: 0.16.7-rc.0 → 0.16.7 Arathi Mani 2021-02-16 09:23:35 -08:00
• f91935ba0a Bump version: 0.16.6-rc.0 → 0.16.7-rc.0 Arathi Mani 2021-02-12 22:09:32 -08:00
• 491e643ae2 Bump version: 0.16.5-rc.0 → 0.16.6-rc.0 Arathi Mani 2021-02-12 22:07:25 -08:00
• 91bac7fef9 Bump version: 0.16.4-rc.0 → 0.16.5-rc.0 Arathi Mani 2021-02-12 22:04:47 -08:00
• 63631dad37 Bump version: 0.16.3-rc.0 → 0.16.4-rc.0 Arathi Mani 2021-02-12 22:02:16 -08:00
• 16b19defcf Bump version: 0.16.2-rc.0 → 0.16.3-rc.0 Arathi Mani 2021-02-12 21:45:13 -08:00
• 98eb91b005 Bump version: 0.16.1-rc.0 → 0.16.2-rc.0 Arathi Mani 2021-02-12 21:43:19 -08:00
• e2a3e41867 Bump version: 0.16.0 → 0.16.1-rc.0 Arathi Mani 2021-02-12 21:32:32 -08:00
• 036b5f8c0f Fix indexing bug in user-specified colors (#2051) Bruce Martin 2021-02-08 18:00:03 -08:00
• e6281baa39 improve error message for OBO parse failure (#2053) Bruce Martin 2021-02-05 12:19:40 -08:00
• 3aef21f76c alpha blending fix in scatterplots (#2033) Bruce Martin 2021-02-05 09:34:37 -08:00
• d821f0eac9 More cellxgene Galaxy information for the extensions (#2024) Björn Grüning 2021-02-03 23:38:54 +01:00
• 3c0b1d45db Fix deprecated np.unicode type (#2035) Marcus Kinsella 2021-02-03 09:22:27 -08:00
• 90a4ff7526 allow cellxgene datasets urls to have a trailing slash or not. (#2028) bmccandless 2021-01-20 15:19:13 -08:00
• d5ad823895 simple solution to the locust test problem (#2026) bmccandless 2021-01-20 08:56:54 -08:00
• 0e48b335be update umap version (#2021) bmccandless 2021-01-13 13:01:46 -08:00
• e264724597 Add extension showcase to documentation (#1878) Ambrose J Carr 2021-01-12 08:55:14 -05:00
• c7eb319817 P value and Log fold change not showing up for all DE results (#2016) bmccandless 2021-01-08 09:44:17 -08:00
• db559467a2 Bump ini from 1.3.5 to 1.3.7 in /client (#2000) dependabot[bot] 2021-01-04 17:14:45 -08:00
• 96362b0b98 Bump urijs from 1.19.2 to 1.19.5 in /client (#2012) dependabot[bot] 2021-01-04 16:45:23 -08:00
• 7599af252d Update compatibility test (#2009) bmccandless 2020-12-21 12:38:07 -08:00
• f07e174a06 Fix PR Template (#1999) Trent Smith 2020-12-17 16:29:23 -08:00
• 46d02b1987 Handle schema v1.1.0 (#2002) Marcus Kinsella 2020-12-14 15:20:29 -08:00
• 0b91371ea8 check if viewport has changed and render accordingly (#1996) Severiano Badajoz 2020-12-03 15:14:57 -08:00
• c428242878 pull request template (#1997) Trent Smith 2020-12-03 12:13:31 -08:00
• 9be086b1e8 Use sparse=True for from_pandas (#1994) Isaiah Norton 2020-12-02 16:39:19 -05:00
• 9a34264f92 Pin tiledb version to exclude 0.7.2 (#1993) maniarathi 2020-11-30 11:54:33 -05:00
• 66e55ba59a Replace outdated locustio package with locust package. (#1992) maniarathi 2020-11-30 10:11:57 -05:00
• f700fb7757 Setup codeql scanning for security and code quality analysis (#1991) maniarathi 2020-11-24 21:53:10 -05:00
• ae310097dd Fix typo (#1990) maniarathi 2020-11-24 12:23:21 -05:00
• ea70a35a01 Fixing locust scale tests for cellxgene loading apis and adding a Github Actions workflow to run the tests every Sunday. (#1988) maniarathi 2020-11-24 12:08:57 -05:00
• 16718f392f Sorry! Undo-ing commit to main maniarathi 2020-11-24 10:22:24 -05:00
• ad6b1928e4 Upgrade anndata and h5py maniarathi 2020-11-24 10:21:24 -05:00
• 2cc02a84cb Convert float annotations if possible. (#1987) bmccandless 2020-11-20 15:01:53 -08:00
• f77038ad58 Permit other keys in the cxguser cookie (#1982) Marcus Kinsella 2020-11-18 17:58:33 -08:00
• 2cf55ab819 thuang-compress-annotation (#1980) Timmy Huang 2020-11-17 14:05:07 -08:00
• 095db02439 Remove deprecated health endpoint (#1943) bmccandless 2020-11-13 10:49:11 -08:00
• 85fc000418 Bump dot-prop from 4.2.0 to 4.2.1 in /client (#1954) dependabot[bot] 2020-11-09 22:05:34 -08:00
• 34742b9a94 Add link to dev_docs in Contributing section (#1957) Isaiah Norton 2020-11-10 00:57:00 -05:00
• 06b88cda20 do not update GPU buffers if data has not changed (#1967) Bruce Martin 2020-11-09 10:41:39 -08:00
• 23714bc9f8 Fix bug that occurs when all categories are removed. (#1974) bmccandless 2020-11-06 18:04:14 -08:00
• e51aca7561 Bump version: 0.16.6-rc.0 → 0.16.6 0.16.6 Seve Badajoz 2020-11-06 09:58:13 -08:00
• e892e64685 Convert HGNC ids to their symbol (#1972) Marcus Kinsella 2020-11-06 09:27:49 -08:00
• 39a1124c35 Fix manifest to include schema definitions (#1965) Marcus Kinsella 2020-11-05 09:41:05 -08:00
• b5856ff9bc fix accidental state error (#1966) Bruce Martin 2020-11-04 18:46:04 -08:00