7 Commits

Author	SHA1	Message	Date
Charlotte Weaver	bc0cecbd1c	Release Test (#427) ... * bump-update * Release Test!	2018-11-14 11:03:52 -08:00
Charlotte Weaver	aa29c91470	Prepare fixes (#416) ... * Error on overwrite=false but no output file * Add prepare requirements to requirements.txt * no saved output error -> warning * Catch clustering import error * lint fixes * Fix missing output message	2018-11-09 13:51:30 -08:00
Charlotte Weaver	dd56d0937c	fix anaconda build (#421) ... * fix anaconda build * Added link for TKAgg * Add matplotlib to requirements We are pulling it in through scanpy, but since we are importing it directly we should include it explicitly	2018-11-09 13:22:45 -08:00
Charlotte Weaver	7d5c054b90	Launch validation (#414) ... * WIP * Cleanup * Validation * typo * Max category limit 100 -> 500	2018-11-07 13:01:13 -08:00
Bruce Martin	2d5bc9d0c9	Performance work, plus fix #405 (#406) ... * remove memoization * update to flash 1.0.2; turn on threading * stand-alone helper routines for array slicing * fix issue #405 * reset diffexp state when world changes * performance work in dimension creation; fix world slicing bug * update tests to match new state mgmt api * update flask * do not make dimensions for useless annotations * update test to match optimizations	2018-11-05 13:57:58 -08:00
Jeremy Freeman	e2d864a336	integrate prepare cli (#401) ... * move prepare into main CLI as subcommand * naming and formatting tweaks to better match launch subcommand	2018-11-03 10:48:05 -04:00
Jeremy Freeman	0c8a07ac13	CLI refactor (#396) ... * refactor cli to improve ux and enable easy incorporation of prepare as a subcommand * switches to use click, which removes some boilerplate and gets us some improved ux for free * changes the entry point for the cli * changes the name of the browser option to --open and makes the default false	2018-11-02 10:52:50 -04:00