Commit Graph
10 Commits
Author SHA1 Message Date
Severiano Badajoz 8d725b1ad9 centroid labels (#872)
* refactor reducer to no longer support hover state and hold many labels

* refactor to generate centroidCoordinates for all values of a category

* create hash for function and memoize export

* create button to display all labels for a category

* clear state

* create label for each thing

* calculate on each value

* change to in place modification of map

* switch to for loop with iterator instead of forEach

* use map from centroidLabel instead of creating copy

* adapt for map

* utilize tarrays

* begin documentation

* disable centroids if in zoom mode

* clean up

* persist uncalc coordinates

* document

* clean up and document

* cleanup and document

* fix

* fix undefined labels and document changes

* fix first element skip

* fix conditional recalc

* rename centroidLabel -> centroidLabels

* break out dilation on hover to new reducer

* numerous styling changes for readability

* change centroid icon

* remove colorAccessor from parameters

* recalc centroids on world change

* make label toggle undoable

* remove unused import

* highlight labels on hover

* remove special characters from svg id

* lighten backdrop

* only generate new centroids if they pre-exist

* fix issue with spaces in catagorical value name

* add label buttons to menubar

* change reducer to use colorAccessor and have single toggle

* fix check to see if svg should be rendered

* move svg overlays onto a single svg layer

* dilate on label hover

* remove logs

* allow centroid to update along side regl renders

* allow actions to pass through svg if in zoom mode

* remove artifact from circle

* remove comment

* remove disabling of centroid button

* fix conditional map to screen

* make styling label conditions stricter

* prettier

* refactor onto master

* refactor computePointFlags() to use pointDilation store

* notify when viewport changes

* move svg attributes out of lasso setup and prevent rerenders/writes

* begin playing with transform matrix

* first solution for camera interaction

* create transform using nested groups

* semi-working method using nested groups with transforms

* inversely scale text

* properly do final transform

* cleanup dead / test code

* reinstate original functionality

* breakout centroid labels labels into separate component

* default toggle on for testing

* separate lasso and centroid layers

* remove unnecessary attributes, working hover

* dilation on label hover

* fix dilation on scatterplot

* add dilation on label hover

* break overlay into separate component

* make overlay agnostic to children

* move label mouse actions to centroidlabels component, add overlay state

* remove lasso on switch to camera

* disallow user selection

* fix reducer

* fix subset with continuous color error

* reset labels on color by continuous

* revert centroids on by default

* refactor for nested restructuring

* remove update checking

* remove unused method

* readd deleted hover delay

* remove old centroid setup

* remove centroid from undoable

* cleanup dead code

* remove dead code

* rollback unnecessary changes

* begin adding annotation functionality

* add annotation functionality

* add reset and undo functionality

* change centroids on layout change

* don't create label for unassigned

* add comment pointing out POI for performance

* touch up matrix transform comment

* add comment explaining coordinate space and children's assumed space

* remove dead code

* switch to pure component

* connect centroidLabels to redux

* clean up camera check and null result

* tool tip change

* rename centroid toggle and the like

* fix the misalignment of buttons, also make blueprint use consistent

* fix comment spelling mistakes

* introduce variable for cleaner logic expressions and state assignment

* alter tooltip text to back color by interaction

* remove manual iterator manipulation for forEach()

* remove debounce

* nit fix

* tooltip wording fix

* lint
2020-01-22 13:40:22 -08:00
Severiano Badajoz 334b8bb8da draw labels marking the centroids of category value clusters (#809)
* Connect mouse over events to reducer actions

* Change Styling on hover

* Rename reducer actions to be more descriptive

* Reorder reducer in cascade

* Create centroid calculation util

* Whitespace

* Typo fix, use correct action

* Create centroid calc util

* Create centroid svg setup

* Refactor existing svg layer to toolSVG

* Change calcCentroid signature and centroidXY to match mapPointToScreen

* Add id and styling

* Run prettier

* Set z-index to 999

* Draw the label

* Introduce the centroid SVG, refactor code to allow both SVG layers

* Add text label and compute radius based on population

* Implement optional chaining

* Update font family

* Optimize calcMeanCentroid()

* Create and utilize calcMedianCentroid()

* Remove mass circle from label

* Remove styling change on hover

* Remove reducer action logs

* Prettier

* Swap out binds for arrow functions

* Style text

* switch from selectAll() to select()

* Reflect centroid container's purpose in id

* Remove mass from the output

* Swap to obj

* Add finite check

* Don't draw centroid if no finite values

* Fix finite check

* Remove log

* Toggle label coloring based on colorBy state

* Pass cursor events through centroid svg
2019-06-13 15:40:57 -07:00
Bruce Martin 7275d9d4dc Graph selection state management and history bug fixes (#679)
* save graph selection in redux state

* fix old graph brush select regressions

* refactor graph brush selection to work with undo/redo

* update tests to match new crossfilter spatial select API

* graph selection state now in redux

* remove dead code

* sync graph selection with redux state; improvements to undoable machinery

* fix regression in undoable

* differentiate graph selection cancel from deselect action

* simplify calculation

* remove debugging code

* fix responsive repaint bug in graph selection tool

* undoable debugging and code cleanliness

* undoable action filter state now merges, rather than replaces

* improve comments

* add debounce to undoable action filter; improve comments and debug sanity check code

* comments

* fix undoable bug with clear scatterplot actions

* disable undoable debug flag

* cleanup API and comments around statemachine

* add test id attribute to lasso

* add better error handling for gene fetch requests
2019-04-08 15:53:12 -07:00
Charlotte Weaver 2bae696986 Smoke tests (#604)
smoke tests
2019-02-27 15:46:58 -08:00
Colin Megill dbb3a309a9 Lasso (#586)
* lasso working

* break out invert into own function

* action

* add spatial dimension to crossfilter, in support of polygon lasso

* improve comments on new dimension API

* lasso vs zoom
2019-02-08 11:48:51 -08:00
Colin Megill dbff824854 Viewport fills entire screen (#430)
* full pane webgl and svg

* fixes for full pane selection and centering

* force graph remount, clear brush state
2018-11-13 11:45:38 -05:00
bkmartinjr 967ea21d8a delint components/graph 2018-09-21 15:28:06 -04:00
Colin Megill 3c9de7be9e add d3 and scale chromatic imports 2018-08-16 10:11:18 -04:00
Charlotte Weaver 85506db971 Updating to latest cellxgene client code
Fixes the build error in the old version. 

Reverted the API version since we changed directions from updating the API to refactoring the server structure instead.
2018-07-05 13:37:26 -07:00
Charlotte Weaver dd5fa57259 renaming backend, cellxgene to server, client respectively 2018-06-26 11:41:32 -07:00