65ea1b673f
Dunitz 1685 hosted annotations ( #1789 )
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* save tiledb array to s3, dont cache user annotations
* Add option to disable annotation filename prompt (#1787 )
Co-authored-by: Madison Dunitz <dunitzm@gmail.com >
* set tiledb default context in cxg_adaptor
Co-authored-by: maniarathi <arathi.mani@chanzuckerberg.com >
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com >
2020-08-24 18:26:08 -05:00
maniarathi
bc150a8469
Fixing bugs in cxg conversion tool ( #1782 )
2020-08-22 09:53:59 -07:00
maniarathi
a5c9ffa880
When reading annotations from tiledb, check if the values are byte literals and if so, decode them. Also pin s3f3 to 0.4.2. ( #1788 )
2020-08-22 09:42:11 -07:00
maniarathi
994c20c094
Move cxgtool into CLI and modularize conversion functions ( #1701 )
2020-08-17 17:28:29 -07:00
maniarathi
508889f74b
Refactoring cxg utility classes in preparation for CXG conversion tooling ( #1739 )
2020-08-14 16:51:13 -07:00
Madison Dunitz
b034055c35
update to get_secrets_key ( #1755 )
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* raise exception when get_secrets fails, get db_uri and set as a default_dataset_config var
* log as info not an error
2020-08-14 18:17:21 -05:00
Madison Dunitz
6a82030558
remove db_uri secret ( #1751 )
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* remove db_uri secret
* add test to catch bug in future
2020-08-14 12:38:46 -05:00
Madison Dunitz
2689d8d2c0
Create hosted user annotations [1685] ( #1726 )
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* add function to retrieve latest annotation from db, db updates
* read and write tiledb arrays
* adding tests
2020-08-13 19:07:17 -05:00
maniarathi
cdae4f9f10
Reorganize the server testing directory ( #1705 )
2020-08-05 08:31:02 -07:00
