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7 Commits
Author SHA1 Message Date
Matt Weiden 546e272a60 Add user-defined category-label colors (#1402) 
* Add user-defined category-label colors

Fixes https://github.com/chanzuckerberg/cellxgene/issues/1152

As described in https://github.com/chanzuckerberg/cellxgene/issues/1307

* Respond to feedback from @bkmartinjr in nodejs

* Respond to feedback from @bkmartinjr in python

* Add tests to the server module

* Autoformat python, run linter

* Make colors_get error handling specific

* Respond to feedback from @bkmartinjr

* Respond to feedback from @bkmartinjr

* Fix whitespace

* Fix python lint errrors

* Update documentation

* Add --disable-user-colors option to launch and cxgtool.py

* Fix python formatting

* Rename '--disable-user-colors' to '--disable-custom-colors'
 2020-04-26 22:52:57 -07:00
Bruce Martin d22300e3db fix typo in cxgtool bool handler (#1404) 2020-04-17 11:11:14 -07:00
Bruce Martin cfacdb15a8 fix typo (#1379) 2020-04-10 12:58:30 -07:00
Bruce Martin 7c56041b11 categorical type handling fix (#1342) 
* fix numeric category conversion bug

* correctly compute categorical summaries

* lint

* remove debugging print
 2020-04-02 14:44:07 -07:00
Bruce Martin 33ce95ba09 work-around for column name encoding bug (#1324) 
* add attribute cleanup

* fix typo

* handle mappings

* logging

* fix regex

* remove debugging printfs

* update masked characters

* fix typo

* add missing incr
 2020-04-01 15:06:21 -07:00
Matt Weiden c7f2032dd7 Add user-generated annotations tests to the server (#1164) 
* Add user-generated annotations tests to the server

Partially completes https://github.com/chanzuckerberg/cellxgene/issues/969

* Auto-format python code

* @skip_if: passing lambdas > than property strings

* Respond to feedback from @bkmartinjr
 2020-02-23 15:32:13 -08:00
Bruce Martin d2bae0c4f6 CXG creator and dataset parameters (#1163) 
* remove redundant call to make_response (lint)

* initial commit of H5AD to CXG converter

* lint

* PR review suggested comments

* cxg adaptor now understands group metadata

* lint
 2020-02-21 12:49:45 -07:00