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718 Commits 22 Branches 50 Tags
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21 Commits
Author SHA1 Message Date
Colin Megill 0ef6c36f4c Cluster Occupancy (n dim cube) (#513) 
* create occupancy component

* occupancy working

* centering, width, flex spacing

* add is-number

* extend sort to cover string + int

* proof of concept sorted occupancy

* handle undefined occupancy entry, cleanup

* only render occupancy when colorby is cat

* cleanup unused vars

* cleanup
 2018-12-17 14:19:48 -05:00
Bruce Martin 296ed752fa Improved summary counts of annotation values (#478) 
* convert annotation summary to a Map

* add 2d annotation count summary

* add memoization on 2D annotation counting

* add tests for annotation summarization

* fix import/exports

* rename WorldOps to WorldUtil

* rename WorldOps to WorldUtil

* add comment
 2018-12-03 09:15:03 -08:00
Bruce Martin 138d30909a improve type handling for non-string annotation data (#465) 
* improve type handling for non-string annotation data

* improve clarity of code
 2018-11-26 10:32:29 -08:00
Colin Megill ef80c8df2a Change color scales to rainbow (#449) 
* rainbow

* eslint

* remove comments
 2018-11-15 18:17:55 -08:00
Bruce Martin bc15e9229f update config params to match REST API spec (#393) 2018-10-30 11:03:40 -07:00
Colin Megill ed66ae6e4a tooltips, copy, scatterplot tray (#383) 
* tooltips, copy, scatterplot tray

* reset interface

* copy
 2018-10-26 19:21:39 -04:00
Colin Megill 7aa390b5a1 left sidebar improvements (#368) 
* left sidebar improvements

* lint
 2018-10-24 10:21:18 -04:00
Colin Megill 96675f806c hotfix duplicate globals declaration 2018-10-22 16:39:41 -04:00
Colin Megill df671192be Begin integrating blueprint (#359) 
* toast test

* modify webpack build to allow for global CSS; use CSS modules to scope component styling

* remove heatmap

* add label to index resets

* swapping out buttons for blueprint

* adding constants to globals

* swapping out blueprint buttons

* title position, sidebar improvements

* sidebar styles

* adding toasts for validation errors

* zebra section trial

* integrating blueprint, switching buttons over, breaking out scatter

* clean up console
 2018-10-22 15:46:37 -04:00
Bruce Martin 0c271bc815 categorical metadata performance work (#356) 
* do not create unecessary option state for categories we will not display

* performance improvements for categorical metadata handling
 2018-10-22 09:56:41 -07:00
Bruce Martin 5dea303bcd handle case of excessively large number of options in categorical met… (#350) 
* handle case of excessively large number of options in categorical metadata
* move max category options count into globals
 2018-10-18 18:07:39 -07:00
Bruce Martin f9f43c42c0 more lint - components (#336) 
* more lint

* fix typo introduced in delinting

* more lint

* remove dead code

* lint fixes

* lint
 2018-10-17 07:17:51 -07:00
Colin Megill 952578680a Remove heatmap, add diffexp info to histograms (#339) 
* Create Release_Validation_Recipe.md

* compose middle ware for redux devtools

* update package.json and lock

* remove heatmap, add to left side bar

* redux devtools extension
 2018-10-16 16:29:20 -07:00
Bruce Martin 6b0aafd27c package dependency cleanup (#330) 
* update npm packages.  babel 7, redux 4, etc

* remove obsolete babel config file

* use correct icons
 2018-10-15 17:36:13 -07:00
Colin Megill 5165297e2a position tweak 2018-10-15 11:20:52 -07:00
bkmartinjr d9a75fcd10 more linting 2018-09-19 10:30:14 -04:00
Bruce Martin d4e850d18f #130 redux refactor (#208) 
* mocks for redux refactor - for discussion

* more API design on redux refactor

* add new reuqired dependencies for build

* change babel target to use modern browser

* remove dead code

* remove dead code - joy plots

* checkpoint on redux refactoring

* checkpoint on redux refactoring

* fix mistaken rebase conflict resolution

* dead code removal; add name to dataframe backmap

* rename dataframe to universe

* update eslint config to more closely match prettier

* lint

* more eslint updates to match prettier

* additional config to make eslint match prettier

* add expression data to Universe/World

* remove obsolete reducers

* lint fixes

* more eslint cleanup

* lint

* lint

* fix but in countAllOnes when dimensions gt 1

* lint; do not display name metadata field

* lint; colors refactor

* lint; colors refactor

* update comments

* first cut at regraph and reset

* enable object-curly-braces consistent mode

* lint, handle regraph with no selection

* fix expression scatterplot bugs

* fix regression legend display

* add expression data cache

* remove console logging

* reset cell color on regraph/reset

* remove obsolete server URLs

* rename UniverseV01 to Universe_REST_API_v01

* add additional comments on the varDataCache

* merge universe reducer into controls reducer; simplify initialization-related actions

* use spread operator

* fix erroneous comment

* convert universe and world state to plain objects, and functionalize supporting code (remove ES6 classes)

* use spread operator

* lint

* improve variable names

* rename obsCrossfilter to crossfilter and obsDimensionMap to dimensionMap

* rename controls2 to controls
 2018-09-17 20:43:39 -07:00
bkmartinjr ff07bb1ebb fix for _.get typo 2018-08-04 15:14:40 -07:00
Colin Megill b574542a60 _.get fixes 2018-07-23 17:06:32 -04:00
Charlotte Weaver 85506db971 Updating to latest cellxgene client code 
Fixes the build error in the old version. 

Reverted the API version since we changed directions from updating the API to refactoring the server structure instead.
 2018-07-05 13:37:26 -07:00
Charlotte Weaver dd5fa57259 renaming backend, cellxgene to server, client respectively 2018-06-26 11:41:32 -07:00