6 Commits

Include renames

Author	SHA1	Message	Date
Bruce Martin	3dc45d6330	do not hard-wire column names in annotations (#785) ... * enforce column name uniqueness for obs and var * parameterize the column name containing obs and var user-readable names * use the new annotation index value from schema * update f/e unit tests * PR review suggestions * lint	2019-05-24 21:00:54 -07:00
Bruce Martin	2357d0c1b8	layout change UI (#776) ... * add layout to schema * add layout choice action and reducer * multi layout UI * update unit tests * add missing file * update test schema * fix duplicate test id * fix tabs * PR lint * fix pytest	2019-05-22 13:21:33 -07:00
Bruce Martin	efa1709158	add multi-layout support to back-end (#766) ... * add multi-layout support to back-end * remove obsolete code * temporary code to apply heuristic choice of default layout * fix tests * update python tests * more py lint * PR review changes * more PR lint * PR lint	2019-05-16 14:49:22 -07:00
Bruce Martin	6b33315cbe	Dataframe (#576) ... * initial dataframe commit * initial dataframe port of core app * rename variables for clarity * remove unused import * comment out unused code * fix array handling bug in crossfilter dimension creation * allow creation of empty dataframes * handle non-existent columns * handle non-existent columns * revise tests for new dataframe * comments for clarity * comments for clarity * generate bulk add placeholder with real gene names * fix bug in gene name adding * more dataframe unit tests * fix bug - subset from current world, not universe * put cut and pasted code into a single function * improve caching of crossfilter * remove cascading update bug from graph * more performance work * improve state handling for scatterplot * performance optimization of critical path * add column summarization * dataframe utils * add callOnceLazy * fix tests * minor updates found during review * fix misspelling * remove RESTv02 from function names * comment cleanup * cut/icut col parameter defaults to null * break up large test * improve tests and comments on dataframe at/has functions	2019-02-22 11:31:34 -08:00
Bruce Martin	b90447c387	binary wire format with flatbuffers (#509) ... * first flatbuffer schema * do not lint auto-generated files * add flatbuffers package * add flatbuffer module * wire up /data/X/T route * use flatbuffers for matrix data fetc * clarity and comments * add flatbuffer layout route * clean up obsolete code * fix tests * move flake8 config to setup.cfg * add comments * lint * rework layout routes for fbs * add more type support to fbs * lint * add flatbuffer support for annotations * function name improvements * fix botched merge with master * remove unused import * route cleanup for flatbuffers * rename function for clarity * add missing globals to Jest tests * fix client JS tests * fix routes for Python tests * comments for clarity * non-finite floating point hardening * more non-finite number handling * lint * fix tests for summarizeAnnotations * harden diffexp calculation against FP errors * cleanup unused code * lint * add encoding tests for flatbuffers * application type specified as strings * fix spelling error * improve variable names * add note about documentation gap * rename FBS DataFrame to Matrix	2019-01-09 14:26:05 -08:00
Bruce Martin	b77d7b14b5	bkmartinjr/world tests (#306) ... First cut at test for stateManager/world. Test data for REST responses factored out into separate file for shared use by Universe and World tests. Also cleaned up some debugging code.	2018-10-10 18:05:19 -07:00