Currently the client build is not reproducible since, each time you run
`make build-client` the package lockfile is updated. This should be
handled separately by `make gen-package-lock` when developers actually
want to update the dependencies.
`npm ci` installs dependencies directly from the lockfile without
updating them, making builds reproducible.
* Fix Makefile whitespace and .PHONY use
* Fix Makefile filename
* Modularize Makefile into client and server Makefiles
Part of the reason that the Makefile in the root directory is a bit
complicated is that it tries to handle tasks that can be handled
separately in the client and server modules.
This commit pushes some of the make logic specific to each module into
their own makefiles and calls out to those makefiles from that in the
project root.
* Add auto-formatting to client and server modules
One thing that can make linting faster is auto-formatting. This commit
adds the yapf auto-formatting tool to the server module and uses
eslint's "fix" functionality to speed up the linting/formatting process.
* Add yapf for automatic code formatting
* Add a root test target that calls sub-tests
* Apply yapf to python files
* Do not duplicate npm commands, simply pass through
* Update documentation
* Do not shadow reserved word len
* Add general test target
* Fix make call in dev-env
* Use black instead of yapf
* Run flake8 from the root directory
* Revert "Apply yapf to python files"
This reverts commit cdca128a01.
* Apply black to python code
* Resolve lint errors resulting from black format
* Add explanation of server unit tests in dev guidelines
* rename config param label-file
* annotations rework - CLI params, file naming and backups
* lint
* improve cli option error checks
* enable session cookies
* enable session cookies
* add session id
* name annotations file in multi-dataset and multi-user safe manner
* pass data user hash to front-end
* add annotation collection name support to front-end
* add constant for annotation data collection name
* parameterize annotation collection name; make it sticky in the session
* clarify comments
* hard wire a temporary data collection name for testing
* prettier
* test comment
* package command
* set annotations filename dialog
* name and hash are visible
* wire up data collection capture
* anno error states
* label validation should not treat empty string as error
* disable Submit if no label or category entered
* edit category name error states
* flex start
* pr cleanup
* label name validation fixes
* PR comment responses
* Create right sidebar files, move histos over
* restructure continuous legend + all padding
* right sidebar file
* proper graph positioning and resize
* new lasso values since right sidebar
* fix autosave position
* cache common results to reduce jank
* add util function in support of annotation labelling
* enable/disable annotation edit menus per issue 972; improve formatting
* PR review requests
* initial cut at backed mode
* make flask multithreading conditional on debug flag
* update X access to support backed mode
* lint
* improve help message for backed mode
* fix tests
* add MatrixProxy to normalize supported matrix types
* add FAQ entry for --backed
* remove use of matrix.T
* clean up
* add ability to disable diffexp from CLI; add hueristic to detect likely slow diffexp calculation, and warn user
* fix tests
* do not print diffexp speed warning if diffexp is disabled
* tweak wording of diffexp speed messages
* add FAQ entry on --disable-diffexp
* revise heuristic for warning about slow diffexp
* use quick tooltip delay on diffexp button
* freeze objects
* component rendering perf work
* use PureComponent where safe
* remove obsolete WorldUtil code
* make brushable histogram a pure component
* tweak overflow and add truncation
* remove log
* alter char limit to evenly space around occupancy
* use global hover delay
* create constants for truncation lengths and fix truncation on self color
* create globals for short and long sidebar value length
* fix alignment
* create quick delay global
* add about arg
* add simple url validator
* attach about link to config api
* add links to configDefaults
* add conditional link in top left and menu item
* whitespace
* change to lower case
* move --about arg before click.command()
if this fixes it I have no idea why
* change link>URL
* be more descriptive about URL
* Make error more explicit
* refactor attach_data to accept about
* format
* change icon
* add trailing parenthesis
* whitespace
* truncate middle of long title names
* remove width
* In the case of VERY long titles, hide overflow
* align bottom of title with cellxgene
* add character length global and shrink length
