Commit Graph

3 Commits

Author SHA1 Message Date
Bruce Martin
0b1ab02a60 rename X_approx_distribution to X_approximate_distribution (#2337) 2021-07-27 13:43:04 -07:00
Bruce Martin
1ea2b7fe80 fix for incorrect stats computation in diff exp t-test (#2318)
* 2211 fixes

* lint

* lint

* add missing test and bug found by test

* change terminology for count distribution

* update scanpy requirement

* update scanpy requirement
2021-07-23 11:36:26 -07:00
Severiano Badajoz
28b526b3fc feat: diffexp returns two genesets (#2230)
* feat: return two lists for diffexp (#2221)

* sp

* split out derive sort order, tests passing

* sp

* return diff exp results in two lists

* update

* copy implementation over to desktop

* add tests for two lists

* small fixes to complete backend implementation

* accept new diffexp response

* map diff exp response to genesets

* delete )

* name diffexp genesets with population names

* take constants out of state and allow width prop to override

* shorten mini-histo properly truncate and resize depending on expansion

* prepend new genesets

* rename data within diffexp action

* backend

* move diffexp ttest to common code module, update tests

* update for unit tests

* reference actual var

Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com>
Co-authored-by: Madison Dunitz <dunitzm@gmail.com>
2021-06-08 21:02:19 +00:00