5 Commits

Author	SHA1	Message	Date
Jeremy Freeman	3151306d7e	readme updates (#436) ... lots of updates to the readme to: improve scientific and technical clarity, reflect all recent changes to the CLI (especially the addition of prepare), reflect all recent changes to our installation, improve explanation of how to handle a few different kinds of data, and expand instructions on contributing and developing	2018-11-15 18:18:30 -08:00
Charlotte Weaver	94f95d6565	CLI Launch (#366) ... * Scanpy engine now required Without the --engine param we need to error if scanpy engine cannot be imported rather than waiting for all engines * CLI options and help matches proposal (but not all options hooked up yet) * Flesh out top level args * Move computation args to engine * CLI input file (#374) * Fix test command (tests still won't work) * Input is file instead of directory - also renamed example file * Csweaver/debug (#376) * Respect debug flag for logging flask calls * Add loading messages * max categories (#377) * Add max categories * Rename max_categories to category_selection_limit * ensure whole numbers	2018-10-24 19:28:59 -07:00
Bruce Martin	ee0b066eb6	remove obsolete schema from example data (#315)	2018-10-11 13:02:28 -07:00
Sidney Bell	77ca5c267e	Update readme (#137) ... * Update readme * Add demo gif * Update README.md * Update README.md * Update README.md * Update README.md * Update README.md	2018-08-03 10:23:57 -07:00
Charlotte Weaver	a3bf802aec	Add example dataset	2018-07-06 16:03:24 -07:00