tech: test tests using latest installations

* Bump version: 1.1.1 → 1.1.2-rc.0

* fix: release candidate 1.1.2

* Bump version: 1.1.2-rc.0 → 1.1.2

* promote

---------

Co-authored-by: atarashansky <atarashansky@CZIMACOS3990.hsd1.ma.comcast.net>

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 1.1.1
+current_version = 1.1.2
 commit = True
 parse = (?P<major>\d+)\.(?P<minor>\d+)\.(?P<patch>\d+)(?:-(?P<prerel>rc)\.(?P<prerelversion>\d+))?
 serialize = 

.github/workflows/close-stale-prs.yml

@@ -0,0 +1,23 @@
+name: Close inactive pull requests
+on:
+  schedule:
+    - cron: "30 1 * * *"
+
+jobs:
+  close-issues:
+    runs-on: ubuntu-latest
+    permissions:
+      issues: write
+      pull-requests: write
+    steps:
+      - uses: actions/stale@v5
+        with:
+          days-before-issue-stale: -1 # Do not mark any issues as stale
+          days-before-pr-stale: 14
+          days-before-pr-close: 3
+          stale-pr-message: "This PR has not seen any activity in the past 2 weeks; if no one comments or reviews it in the next 3 days, this PR will be closed."
+          close-pr-message: "This PR was closed because it has been inactive for 17 days, 3 days since being marked as stale. Please re-open if you still need this to be addressed."
+          stale-pr-label: "stale"
+          close-pr-label: "autoclosed"
+          exempt-draft-pr: true
+          repo-token: ${{ secrets.GITHUB_TOKEN }}

client/package-lock.json

@@ -1,12 +1,12 @@
 {
   "name": "cellxgene",
-  "version": "1.1.1",
+  "version": "1.1.2",
   "lockfileVersion": 2,
   "requires": true,
   "packages": {
     "": {
       "name": "cellxgene",
-      "version": "1.1.1",
+      "version": "1.1.2",
       "license": "MIT",
       "dependencies": {
         "@babel/eslint-parser": "^7.15.0",
@@ -21331,7 +21331,9 @@
           "resolved": "https://registry.npmjs.org/ajv-formats/-/ajv-formats-2.1.1.tgz",
           "integrity": "sha512-Wx0Kx52hxE7C18hkMEggYlEifqWZtYaRgouJor+WMdPnQyEK13vgEWyVNup7SoeeoLMsr4kf5h6dOW11I15MUA==",
           "dev": true,
-          "requires": {}
+          "requires": {
+            "ajv": "^8.0.0"
+          }
         },
         "ajv-keywords": {
           "version": "5.1.0",

client/package.json

@@ -1,6 +1,6 @@
 {
   "name": "cellxgene",
-  "version": "1.1.1",
+  "version": "1.1.2",
   "license": "MIT",
   "description": "cellxgene is a web application for the interactive exploration of single cell sequence data.",
   "repository": "https://github.com/chanzuckerberg/cellxgene",

server/__init__.py

@@ -2,7 +2,7 @@ import logging
 import sys
 from server.common.utils.utils import import_plugins
 
-__version__ = "1.1.1"
+__version__ = "1.1.2"
 display_version = "cellxgene v" + __version__
 
 try:

server/requirements.txt

@@ -3,7 +3,7 @@
 anndata>=0.7.6 # we need to_memory(), added in 0.7.6
 boto3>=1.12.18
 click>=7.1.2
-Flask>=1.0.2
+Flask>=1.0.2,<2.3.0
 Flask-Compress>=1.4.0
 Flask-Cors>=3.0.9  # CVE-2020-25032
 Flask-RESTful>=0.3.6

setup.py

@@ -14,7 +14,7 @@ with open("server/requirements-annotate.txt") as fh:
 
 setup(
     name="cellxgene",
-    version="1.1.1",
+    version="1.1.2",
     packages=find_packages(),
     url="https://github.com/chanzuckerberg/cellxgene",
     license="MIT",