fork/cellxgene

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Charlotte Weaver 6961b64d87 Updated readme for python packaged version

2018-07-16 14:20:50 -07:00

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cellxgene

A React + Redux web application for exploring large scale single cell RNA sequence data.

Requirements

OS: OSX, Windows, Linux
python 3.6
npm
Google Chrome

Installation

clone project

git clone https://github.com/chanzuckerberg/cellxgene.git

install client

cd cellxgene
./bin/build-client

To use with virtual env for python (optional, but recommended)

python3 -m venv <env name>
source <env name>/bin/activate

install server

python setup.py install

run (with demo data)

cellxgene

Thanks to Alex Wolf his help with test data