mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-15 20:57:56 +08:00
b181751493
* add --obs-names and --var-names CLI params * fix lint * performance improvements in scanpy engine * fix lint * fix typo * correctly handle sparse formats in diffexp * fix diffexp and 1d slicing * diffexp uses t-stat, not pval; clean up arg handling * make _slice a static method * revise scanpy tests to match new API
52 lines
876 B
JSON
52 lines
876 B
JSON
{
|
|
"dataframe": {
|
|
"nObs": 2638,
|
|
"nVar": 1838,
|
|
"type": "float32"
|
|
},
|
|
"annotations": {
|
|
"obs": [
|
|
{
|
|
"name": "name",
|
|
"type": "string"
|
|
},
|
|
{
|
|
"name": "n_genes",
|
|
"type": "int32"
|
|
},
|
|
{
|
|
"name": "percent_mito",
|
|
"type": "float32"
|
|
},
|
|
{
|
|
"name": "n_counts",
|
|
"type": "float32"
|
|
},
|
|
{
|
|
"name": "louvain",
|
|
"type": "categorical",
|
|
"categories": [
|
|
"CD4 T cells",
|
|
"CD14+ Monocytes",
|
|
"B cells",
|
|
"CD8 T cells",
|
|
"NK cells",
|
|
"FCGR3A+ Monocytes",
|
|
"Dendritic cells",
|
|
"Megakaryocytes"
|
|
]
|
|
}
|
|
],
|
|
"var": [
|
|
{
|
|
"name": "name",
|
|
"type": "string"
|
|
},
|
|
{
|
|
"name": "n_cells",
|
|
"type": "int32"
|
|
}
|
|
]
|
|
}
|
|
}
|