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r1257: fixed the sorting of BED files

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Heng Li
2025-04-06 10:53:16 -04:00
parent a8094ad859
commit 2ed264db4e
2 changed files with 2 additions and 2 deletions
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2
index.c
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@@ -677,7 +677,7 @@ int mm_idx_alt_read(mm_idx_t *mi, const char *fn)
KRADIX_SORT_INIT(bed, mm_idx_intv1_t, sort_key_bed, 4)
#define sort_key_end(a) ((a).en)
KRADIX_SORT_INIT(end, mm_idx_intv1_t, sort_key_bed, 4)
KRADIX_SORT_INIT(end, mm_idx_intv1_t, sort_key_end, 4)
#define sort_key_jj(a) ((a).off)
KRADIX_SORT_INIT(jj, mm_idx_jjump1_t, sort_key_jj, 4)

2
minimap.h
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@@ -5,7 +5,7 @@
#include <stdio.h>
#include <sys/types.h>
#define MM_VERSION "2.28-r1256-dirty"
#define MM_VERSION "2.28-r1257-dirty"
#define MM_F_NO_DIAG (0x001LL) // no exact diagonal hit
#define MM_F_NO_DUAL (0x002LL) // skip pairs where query name is lexicographically larger than target name