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Heng Li
2026-04-13 23:52:07 -04:00
parent dd5b2c04b8
commit 4ca5a951ca
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misc/paftools.js
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@@ -3750,6 +3750,7 @@ function main(args)
print(" pafcmp compare two PAF files"); print(" pafcmp compare two PAF files");
print(" mason2fq convert mason2-simulated SAM to FASTQ"); print(" mason2fq convert mason2-simulated SAM to FASTQ");
print(" pbsim2fq convert PBSIM-simulated MAF to FASTQ"); print(" pbsim2fq convert PBSIM-simulated MAF to FASTQ");
print(" badread2fa convert Baderead FASTQ to FASTA");
print(" junceval evaluate splice junction consistency with known annotations"); print(" junceval evaluate splice junction consistency with known annotations");
print(" exoneval evaluate exon-level consistency with known annotations"); print(" exoneval evaluate exon-level consistency with known annotations");
print(" ov-eval evaluate read overlap sensitivity using read-to-ref mapping"); print(" ov-eval evaluate read overlap sensitivity using read-to-ref mapping");