564 lines
21 KiB
HTML
564 lines
21 KiB
HTML
{% load static %}
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<!DOCTYPE html>
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<html lang="zh">
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<head>
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<meta charset="utf-8">
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<meta name="viewport" content="width=device-width, initial-scale=1, maximum-scale=1">
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<title>Simple Drawing</title>
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<link rel="stylesheet" href="{% static '/css/layui.css' %}">
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<link rel="stylesheet" href="{% static '/css/mycss.css' %}">
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</head>
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<body>
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<div class="layui-layout layui-layout-admin">
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<div class="layui-header">
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<div class="layui-logo layui-hide-xs layui-bg-black">Simple Drawing</div>
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<!-- 头部区域（可配合layui 已有的水平导航） -->
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<ul class="layui-nav layui-layout-left">
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<li class="layui-nav-item layui-hide-xs" style="margin-left: 200px"><a style="font-size: 30px;" href="index.html">Home</a></li>
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<li class="layui-nav-item layui-hide-xs layui-this" style="margin-left: 200px"><a style="font-size: 30px;"
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href="tools.html">Tools</a></li>
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<li class="layui-nav-item layui-hide-xs " style="margin-left: 200px"><a style="font-size: 30px;" href="about.html">About us</a></li>
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<li class="layui-nav-item layui-hide-xs" style="margin-left: 200px"><i
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class="layui-icon layui-icon-search"></i></li>
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<li class="layui-nav-item layui-hide-xs" style="margin-left: 10px">
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<input type="text" placeholder="Search " name="search" onkeydown="entersearch()" data-toggle="search"
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id="search" class="layui-input"/>
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</li>
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</ul>
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</div>
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<div class="layui-side layui-bg-black">
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<div class="layui-side-scroll">
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<!-- 左侧导航区域（可配合layui已有的垂直导航） -->
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<ul class="layui-nav layui-nav-tree" lay-filter="test">
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<li style="margin-top: 20px;" class="layui-nav-item">
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<a style="font-size: 25px;" class="" href="javascript:;">Basics</a>
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<dl class="layui-nav-child">
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<dd><a style="font-size: 20px;" onclick=blast()>blast</a></dd>
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<dd><a style="font-size: 20px;" onclick="genbank_to_fasta()">gbk to fa</a></dd>
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<dd><a style="font-size: 20px;" onclick=gff_to_gtf()>gff to gtf</a></dd>
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<dd><a style="font-size: 20px;" onclick=orf()>orf</a></dd>
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<dd><a style="font-size: 20px;" onclick=Basics()>seq basics</a></dd>
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</dl>
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</li>
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<li style="margin-top: 10px;" class="layui-nav-item">
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<a style="font-size: 25px;" href="javascript:;">Gene Family</a>
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<dl class="layui-nav-child">
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<dd><a style="font-size: 20px;" onclick=pfam()>pfam</a></dd>
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</dl>
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</li>
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<li style="margin-top: 10px;" class="layui-nav-item">
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<a style="font-size: 25px;" href="javascript:;">Omics</a>
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<dl class="layui-nav-child">
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<dd><a href="javascript:;" style="font-size: 20px;" onclick=Differential_expression_analysis()>deg</a></dd>
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<dd><a href="javascript:;" style="font-size: 20px;" onclick=fastqc()>fastqc</a></dd>
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</dl>
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</li>
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</ul>
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</div>
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</div>
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<div class="layui-body" id="main_show" style="background-color: rgb(250, 250, 250);">
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<!--<div class="declare_box">
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</div>-->
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<div class="layui-footer">
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<!-- 底部固定区域 -->
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底部固定区域
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</div>
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</div>
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</div>
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<script src="{% static 'layui.js' %}"></script>
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<script>
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//JS
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layui.use(['element', 'layer', 'util'], function () {
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var element = layui.element
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, layer = layui.layer
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, util = layui.util
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, $ = layui.$;
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//头部事件
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util.event('lay-header-event', {
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//左侧菜单事件
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menuLeft: function (othis) {
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layer.msg('展开左侧菜单的操作', {icon: 0});
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}
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, menuRight: function () {
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layer.open({
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type: 1
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, content: '<div style="padding: 15px;">处理右侧面板的操作</div>'
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, area: ['260px', '100%']
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, offset: 'rt' //右上角
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, anim: 5
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, shadeClose: true
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});
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}
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});
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});
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</script>
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<script>
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var $ = layui.jquery;
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var form = layui.form;
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var url_up = "{{ url }}"
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var upload = layui.upload
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var element = layui.element
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var isss = "{{ id }}"
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// 页面跳转加载函数
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function blast() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/blast.html' %}`)
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blast_run()
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form.render();
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}
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function genbank_to_fasta() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/genbank_to_fasta.html' %}`)
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gen_to_fa()
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form.render();
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}
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function gff_to_gtf() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/gff_to_gtf.html' %}`)
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gff()
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form.render();
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}
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function orf() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/orf.html' %}`)
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orf_run()
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form.render();
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}
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function Basics() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/Basics.html' %}`)
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basics_run()
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form.render();
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}
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// 基因家族功能
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function pfam() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/pfam.html' %}`)
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pfam_run()
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form.render();
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}
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// 组学
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function Differential_expression_analysis() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/Differential_expression_analysis.html' %}`)
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Differential_expression_analysis_run()
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form.render();
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}
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function fastqc() {
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temp = $('#main_show')
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temp.empty()
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temp.append(String.raw`{% include 'tools/fastqc.html' %}`)
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fastqc_run()
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form.render();
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}
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// blast
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function blast_run() {
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layui.use('upload', function () {
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var upload = layui.upload;
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//执行实例
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var uploadInst = upload.render({
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elem: '#select_blast_seq' //绑定元素
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, url: url_up + '/tools/' + "blast"
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, data: {
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csrfmiddlewaretoken: '{{ csrf_token }}',
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fl: 1,
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id: isss,
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}
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, accept: 'file'
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, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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layer.load(1); //上传loading
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}
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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});
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});
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layui.use(['upload'], function () {
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var $ = layui.jquery
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, layer = layui.layer;
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upload.render({
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elem: '#select_blast_db'
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, url: url_up + '/tools/' + "blast"
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, auto: false
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, accept: 'file'
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, data: {
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csrfmiddlewaretoken: '{{ csrf_token }}',
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outfmt: document.getElementById("outfmt").value,
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evalue: document.getElementById("evalue").value,
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num_descriptions: document.getElementById("num_descriptions").value,
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type: document.getElementById("type").value,
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id: isss,
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}
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, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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layer.load(1); //上传loading
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}
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, bindAction: '#blast_run'
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=blast&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
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$("#down").append(ab)
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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})
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;
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})
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}
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// gen to fa
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function gen_to_fa() {
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layui.use(['upload'], function () {
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var $ = layui.jquery
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, layer = layui.layer;
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upload.render({
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elem: '#select_gen'
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, url: url_up + '/tools/' + "gen_to_fa"
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, auto: false
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, accept: 'file'
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, data: {
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csrfmiddlewaretoken: '{{ csrf_token }}'
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}
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, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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layer.load(1); //上传loading
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}
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, bindAction: '#gen_to_fa_run'
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=fasta&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
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$("#down").append(ab)
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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})
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;
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})
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}
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function gff() {
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layui.use(['upload'], function () {
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var $ = layui.jquery
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, layer = layui.layer;
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upload.render({
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elem: '#select_gff'
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, url: url_up + '/tools/' + "gff_to_gtf"
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, auto: false
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, accept: 'file'
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, data: {
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csrfmiddlewaretoken: '{{ csrf_token }}'
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}
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, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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layer.load(1); //上传loading
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}
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, bindAction: '#gff_run'
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=gtf&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
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$("#down").append(ab)
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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})
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;
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})
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}
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function orf_run() {
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layui.use(['upload'], function () {
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var $ = layui.jquery
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, layer = layui.layer;
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upload.render({
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elem: '#select_orf'
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, url: url_up + '/tools/' + "orf"
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, auto: false
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, accept: 'file'
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, data: {
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csrfmiddlewaretoken: '{{ csrf_token }}',
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begin: document.getElementById("begin").value,
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end: document.getElementById("end").value,
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Cyclotype: document.getElementById("Cyclotype").value,
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Codons: document.getElementById("Codons").value,
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outfmt: document.getElementById("outfmt").value,
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}
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, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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layer.load(1); //上传loading
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}
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, bindAction: '#orf_run'
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=txt&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
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$("#down").append(ab)
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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})
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;
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})
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}
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function b_data() {
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console.log("wwwwwwwww")
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//obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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data_ = form.val('basics_name')
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data_['csrfmiddlewaretoken'] = "{{ csrf_token }}"
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console.log(data_)
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}
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var data_ = {}
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function basics_run() {
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console.log("dddd")
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layui.use(['upload'], function () {
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var $ = layui.jquery
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, layer = layui.layer;
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upload.render({
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elem: '#select_fa'
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, url: url_up + '/tools/' + "basics"
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, auto: false
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, accept: 'file'
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//{
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//csrfmiddlewaretoken:
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//Sequence_cleaning_: document.getElementById("Sequence_cleaning").value,
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//Sequence_length_: document.getElementById("Sequence_length").value,
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//GC_content_: document.getElementById("GC_content").value,
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//Sequence_flip_: document.getElementById("Sequence_flip").value,
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//Reverse_complementarity_: document.getElementById("Reverse_complementarity").value,
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// Codon_preference: document.getElementById("Codon_preference").value,
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// Codon_frequency: document.getElementById("Codon_frequency").value,
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//}
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, before: function (obj) {
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b_data()
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layer.load(1);
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}
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, data: data_
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, bindAction: '#basics_run'
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=txt&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
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$("#down").append(ab)
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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})
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;
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})
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}
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function pfam_run() {
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layui.use(['upload'], function () {
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var $ = layui.jquery
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, layer = layui.layer;
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upload.render({
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elem: '#select_pfam'
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, url: url_up + '/tools/' + "pfam"
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, auto: false
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, accept: 'file'
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, data: {
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csrfmiddlewaretoken: '{{ csrf_token }}',
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b_dom: document.getElementById("b_dom").value,
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b_seq: document.getElementById("b_seq").value,
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e_dom: document.getElementById("e_dom").value,
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e_seq: document.getElementById("e_seq").value,
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align: document.getElementById("align").value,
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clan_overlap: document.getElementById("clan_overlap").value,
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}
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, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
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layer.load(1); //上传loading
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}
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, bindAction: '#pfam_run'
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, done: function (res, index) {
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layer.closeAll('loading'); //关闭loading
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ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=txt&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
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$("#down").append(ab)
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}
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, error: function (index, upload) {
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layer.closeAll('loading'); //关闭loading
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}
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})
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;
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})
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}
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function Differential_expression_analysis_run() {
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var uploadListIns = upload.render({
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elem: '#testList'
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, elemList: $('#demoList') //列表元素对象
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, url: url_up + '/tools/' + "Differential_expression_analysis" //此处用的是第三方的 http 请求演示，实际使用时改成您自己的上传接口即可。
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, accept: 'file'
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, multiple: true
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, number: 10
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, auto: false
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, bindAction: '#testListAction'
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, choose: function (obj) {
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var that = this;
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var files = this.files = obj.pushFile(); //将每次选择的文件追加到文件队列
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//读取本地文件
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obj.preview(function (index, file, result) {
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var tr = $(['<tr id="upload-' + index + '">'
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, '<td>' + file.name + '</td>'
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, '<td>' + (file.size / 1014).toFixed(1) + 'kb</td>'
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, '<td><div class="layui-progress" lay-filter="progress-demo-' + index + '"><div class="layui-progress-bar" lay-percent=""></div></div></td>'
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, '<td>'
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, '<button class="layui-btn layui-btn-xs demo-reload layui-hide">Re</button>'
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, '<button class="layui-btn layui-btn-xs layui-btn-danger demo-delete">del</button>'
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, '</td>'
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, '</tr>'].join(''));
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//单个重传
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tr.find('.demo-reload').on('click', function () {
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obj.upload(index, file);
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});
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//删除
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tr.find('.demo-delete').on('click', function () {
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delete files[index]; //删除对应的文件
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tr.remove();
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uploadListIns.config.elem.next()[0].value = ''; //清空 input file 值，以免删除后出现同名文件不可选
|
||
});
|
||
|
||
that.elemList.append(tr);
|
||
element.render('progress'); //渲染新加的进度条组件
|
||
});
|
||
}
|
||
, data: {
|
||
csrfmiddlewaretoken: '{{ csrf_token }}',
|
||
{#b_dom: document.getElementById("b_dom").value,#}
|
||
{#b_seq: document.getElementById("b_seq").value,#}
|
||
{#e_dom: document.getElementById("e_dom").value,#}
|
||
{#e_seq: document.getElementById("e_seq").value,#}
|
||
{#align: document.getElementById("align").value,#}
|
||
{#clan_overlap: document.getElementById("clan_overlap").value,#}
|
||
}
|
||
|
||
, done: function (res, index, upload) { //成功的回调
|
||
var that = this;
|
||
//if(res.code == 0){ //上传成功
|
||
var tr = that.elemList.find('tr#upload-' + index)
|
||
, tds = tr.children();
|
||
tds.eq(3).html(''); //清空操作
|
||
delete this.files[index]; //删除文件队列已经上传成功的文件
|
||
return;
|
||
//}
|
||
this.error(index, upload);
|
||
}
|
||
, allDone: function (obj) { //多文件上传完毕后的状态回调
|
||
console.log(obj)
|
||
}
|
||
, error: function (index, upload) { //错误回调
|
||
var that = this;
|
||
var tr = that.elemList.find('tr#upload-' + index)
|
||
, tds = tr.children();
|
||
tds.eq(3).find('.demo-reload').removeClass('layui-hide'); //显示重传
|
||
}
|
||
, progress: function (n, elem, e, index) {
|
||
element.progress('progress-demo-' + index, n + '%');
|
||
}
|
||
});
|
||
|
||
|
||
}
|
||
|
||
// fastqc
|
||
function fastqc_run() {
|
||
layui.use(['upload'], function () {
|
||
var $ = layui.jquery
|
||
, layer = layui.layer;
|
||
upload.render({
|
||
elem: '#select_fastqc'
|
||
, url: url_up + '/tools/' + "fastqc"
|
||
, auto: false
|
||
, accept: 'file'
|
||
, data: {
|
||
csrfmiddlewaretoken: '{{ csrf_token }}',
|
||
format: document.getElementById("format").value,
|
||
}
|
||
, before: function (obj) { //obj参数包含的信息，跟 choose回调完全一致，可参见上文。
|
||
layer.load(1); //上传loading
|
||
}
|
||
, bindAction: '#fastqc_run'
|
||
, done: function (res, index) {
|
||
layer.closeAll('loading'); //关闭loading
|
||
ab = '<a href= "' + url_up + '/chart/down?file_id=' + res.id + "&file_downlode_type=7z&ee=1" + '">' + ' <button type="button" class="layui-btn">downlode</button></a>'
|
||
$("#down").append(ab)
|
||
}
|
||
, error: function (index, upload) {
|
||
layer.closeAll('loading'); //关闭loading
|
||
}
|
||
})
|
||
;
|
||
})
|
||
|
||
}
|
||
|
||
|
||
</script>
|
||
|
||
|
||
</body>
|
||
</html> |