xxay/hifiasm
1
0
Fork 0
mirror of https://github.com/chhylp123/hifiasm.git synced 2026-09-25 19:38:12 +08:00
Code Issues Packages Projects Releases Wiki Activity

remove debug information

Browse Source
This commit is contained in:
Haoyu Cheng
2019-12-24 10:37:40 -05:00
parent ea51239441
commit 29fe35eb21
1 changed files with 22 additions and 22 deletions
Download Patch File Download Diff File Expand all files Collapse all files
Overlaps.cpp
+22 -22
View File
@@ -1435,13 +1435,13 @@ long long n_read, uint64_t* readLen, ma_sub_t* coverage_cut, float shift_rate)
max_left.s = max_right.s = rLen;
max_left.e = max_right.e = 0;
if(i == 5783410)
{
fprintf(stderr, "\n\npaf: \n");
print_overlaps(&paf[i], rLen, interval_s, interval_e);
fprintf(stderr, "\n\nrev_paf: \n");
print_overlaps(&rev_paf[i], rLen, interval_s, interval_e);
}
// if(i == 5783410)
// {
// fprintf(stderr, "\n\npaf: \n");
// print_overlaps(&paf[i], rLen, interval_s, interval_e);
// fprintf(stderr, "\n\nrev_paf: \n");
// print_overlaps(&rev_paf[i], rLen, interval_s, interval_e);
// }
collect_sides(&(paf[i]), rLen, &max_left, &max_right);
@@ -1453,21 +1453,21 @@ long long n_read, uint64_t* readLen, ma_sub_t* coverage_cut, float shift_rate)
}
if(i == 5783410)
{
fprintf(stderr, "max_left.s: %d, max_left.e: %d, max_right.s: %d, max_right.e: %d\n",
max_left.s, max_left.e, max_right.s, max_right.e);
}
// if(i == 5783410)
// {
// fprintf(stderr, "max_left.s: %d, max_left.e: %d, max_right.s: %d, max_right.e: %d\n",
// max_left.s, max_left.e, max_right.s, max_right.e);
// }
collect_contain(&(paf[i]), &(rev_paf[i]), rLen, &max_left, &max_right, 0.1);
///collect_contain(&(rev_paf[i]), rLen, &max_left, &max_right);
if(i == 5783410)
{
fprintf(stderr, "max_left.s: %d, max_left.e: %d, max_right.s: %d, max_right.e: %d\n",
max_left.s, max_left.e, max_right.s, max_right.e);
}
// if(i == 5783410)
// {
// fprintf(stderr, "max_left.s: %d, max_left.e: %d, max_right.s: %d, max_right.e: %d\n",
// max_left.s, max_left.e, max_right.s, max_right.e);
// }
////shift_rate should be (FINAL_OVERLAP_ERROR_RATE*2)
@@ -1490,11 +1490,11 @@ long long n_read, uint64_t* readLen, ma_sub_t* coverage_cut, float shift_rate)
continue;
}
if(i == 5783410)
{
fprintf(stderr, "max_left.s: %d, max_left.e: %d, max_right.s: %d, max_right.e: %d\n",
max_left.s, max_left.e, max_right.s, max_right.e);
}
// if(i == 5783410)
// {
// fprintf(stderr, "max_left.s: %d, max_left.e: %d, max_right.s: %d, max_right.e: %d\n",
// max_left.s, max_left.e, max_right.s, max_right.e);
// }
///now max_left.e > max_right.s && max_left.e - max_right.s is small enough
//[interval_s, interval_e)