before window filling

This commit is contained in:
chhylp123
2022-10-01 23:42:38 -04:00
parent bbd3394b4a
commit 41437764f0
5 changed files with 88 additions and 41 deletions
+1 -1
View File
@@ -1136,7 +1136,7 @@ void correct_ul_overlap(overlap_region_alloc* overlap_list, const ul_idx_t *uref
double max_ov_diff_ec, long long winLen, void *km);
void ul_lalign(overlap_region_alloc* ol, Candidates_list *cl, const ul_idx_t *uref, char *qstr,
uint64_t ql, UC_Read* qu, UC_Read* tu, Correct_dumy* dumy, bit_extz_t *exz,
bit_extz_t *exz1, haplotype_evdience_alloc* hap, kvec_t_u64_warp* v_idx,
haplotype_evdience_alloc* hap, kvec_t_u64_warp* v_idx, overlap_region *aux_o,
double e_rate, int64_t wl, kv_ul_ov_t *aln, int64_t sid, uint64_t hpc_k, void *km);
void ul_lalign_old_ed(overlap_region_alloc* ol, Candidates_list *cl, const ul_idx_t *uref, char *qstr,