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r190: fixed an if_exact() bug

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caused by reverse complement again
This commit is contained in:
Heng Li
2020-04-04 00:51:38 -04:00
parent dbe66d259d
commit 4e3c15ec83
2 changed files with 1 additions and 2 deletions
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1
Assembly.cpp
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@@ -975,7 +975,6 @@ void* Final_overlap_calculate_heap_merge(void* arg)
overlap_region_sort_y_id(b->olist.list, b->olist.length);
ma_hit_sort_tn(R_INF.paf[i].buffer, R_INF.paf[i].length);
ma_hit_sort_tn(R_INF.reverse_paf[i].buffer, R_INF.reverse_paf[i].length);
reverse_complement(b->self_read.seq, b->self_read.length);
update_overlaps(&b->olist, &(R_INF.paf[i]), &b->self_read, &b->ovlp_read, 1, 1);
update_overlaps(&b->olist, &(R_INF.reverse_paf[i]), &b->self_read, &b->ovlp_read, 2, 0);

2
CommandLines.h
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@@ -3,7 +3,7 @@
#include <pthread.h>
#define HA_VERSION "0.3.0-dirty-r189"
#define HA_VERSION "0.3.0-dirty-r190"
#define VERBOSE 0
#define VERBOSE_GFA 0