xxay/hifiasm
1
0
Fork 0
mirror of https://github.com/chhylp123/hifiasm.git synced 2026-09-29 00:38:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

fix warning

Browse Source
This commit is contained in:
chhylp123
2020-04-12 17:46:20 -04:00
parent 20c6c1d2e6
commit b245e9a760
1 changed files with 0 additions and 11 deletions
Download Patch File Download Diff File Expand all files Collapse all files
Overlaps.cpp
-11
View File
@@ -13467,11 +13467,6 @@ kvec_asg_arc_t_warp* new_rtg_edges)
delete_useless_nodes(ug);
// purge_dups(*ug, read_g, coverage_cut, reverse_sources, ruIndex, new_rtg_edges, 0.75, 50, 50, 0.5, max_hang,
// min_ovlp, bubble_dist, drop_ratio, 1);
// deduplicate(*ug, read_g, reverse_sources, 20, 100, 0.05, 0.2, ruIndex, 1);
// delete_useless_nodes(ug);
update_unitig_graph((*ug), read_g, reverse_sources, ruIndex, flag, drop_rate);
renew_utg(ug, read_g, new_rtg_edges);
@@ -22277,19 +22272,13 @@ kvec_asg_arc_t_warp* new_rtg_edges)
renew_utg(ug, read_g, new_rtg_edges);
///enable_debug_mode(1);
purge_dups(*ug, read_g, coverage_cut, reverse_sources, ruIndex, new_rtg_edges, 0.75, 50, 50, 0.5, max_hang,
min_ovlp, bubble_dist, drop_ratio, 0);
delete_useless_nodes(ug);
renew_utg(ug, read_g, new_rtg_edges);
rescue_missing_overlaps_aggressive(*ug, read_g, sources, coverage_cut, ruIndex, max_hang,
min_ovlp, 0, 0, 1, NULL);
renew_utg(ug, read_g, new_rtg_edges);