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459 Commits 11 Branches 54 Tags
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Author SHA1 Message Date
chhylp123 0ce5a7ba5b integration/print het sites 2022-01-17 18:29:48 -05:00
chhylp123 7af0d85258 backup 2021-12-29 21:22:43 -05:00
chhylp123 dbc72b8c2d has bug multiple threads 2021-12-28 21:48:41 -05:00
chhylp123 8a0ec3d575 change ug extraction 2021-12-12 20:59:48 -05:00
chhylp123 9ec286e64e new ul 2021-12-11 14:55:36 -05:00
chhylp123 b640289b19 better read phasing 2021-12-07 22:47:52 -05:00
chhylp123 1e2a9518e5 print dup log 2021-11-29 15:11:02 -05:00
chhylp123 763634e1a9 kpt_dup 2021-11-28 19:35:32 -05:00
chhylp123 26aacdcc2c correct gchains 2021-10-14 15:33:16 -04:00
chhylp123 908b4f3786 bug fix 2021-10-10 14:47:16 -04:00
chhylp123 cb320b88f3 debug ul 2021-10-10 13:37:32 -04:00
chhylp123 7dd4a848b9 debug graph 2021-09-26 13:51:13 -04:00
chhylp123 ed814abf35 before branch 2021-09-16 17:16:30 -04:00
chhylp123 ab80851b94 mempcpy -> memcpy 0.16.1 2021-09-12 17:43:43 -04:00
chhylp123 5e84db0ec9 adjust skew weight 2021-09-10 17:18:48 -04:00
chhylp123 809ca18dda r373 2021-09-10 17:17:44 -04:00
chhylp123 17b5cb21d3 tmp macro 2021-08-30 09:30:48 -04:00
chhylp123 e230b3a55f 0.16.0 release 0.16.0 2021-08-22 21:58:00 -04:00
chhylp123 37b07e4d33 better seeding 2021-08-22 09:53:34 -04:00
chhylp123 bfff640a82 dp opt 2021-08-12 11:16:10 -04:00
chhylp123 6ea66e1290 resolve conflicts 2021-07-27 20:11:22 -04:00
chhylp123 0c81c341d5 update r351 2021-07-27 19:51:20 -04:00
chhylp123 3c8a933b8a Merge remote-tracking branch 'origin/dev-lh3' 2021-07-27 19:50:29 -04:00
chhylp123 f7c3a7c998 fix typo 0.15.5 2021-07-26 00:29:30 -04:00
chhylp123 321acb2d8a update for r350 2021-07-26 00:16:00 -04:00
chhylp123 b14f894160 seperate purgeing and hom peak 2021-07-25 11:23:06 -04:00
chhylp123 6a043540b5 update README 2021-07-22 01:16:28 -04:00
chhylp123 62b7418257 update 0.15.5 2021-07-22 00:59:52 -04:00
chhylp123 a531a4cbda debugging for huge datasets 2021-06-27 07:48:29 -04:00
chhylp123 0410662841 print misjoin debug 0.15.4 2021-06-23 09:49:44 -04:00
chhylp123 5a400af39d r342-misjoin 2021-06-19 14:09:09 -04:00
chhylp123 e3b721c29a r340 2021-06-16 16:44:08 -04:00
chhylp123 5b0a0c85ef ovlp filter 2021-06-13 17:35:09 -04:00
chhylp123 7e06dec2d0 Merge branch 'master' of https://github.com/chhylp123/Long_read_assembly 0.15.3 2021-06-09 20:11:54 -04:00
chhylp123 9dc530cbfb low hamming for sampels with low het rate 2021-06-09 20:10:50 -04:00
chhylp123 ca67e7a9b3 rollback 2021-05-31 18:16:20 -04:00
chhylp123 aa164949f2 backup phasing 2021-05-31 04:19:05 -04:00
chhylp123 e774a83be2 debug mbg 2021-05-30 09:02:25 -04:00
chhylp123 a39f01f4d8 haplotype popping 2021-05-24 19:43:50 -04:00
chhylp123 9e6dde7fb2 backpup 2021-05-22 10:48:49 -04:00
chhylp123 46c0157f79 new ovlp collect 2021-05-22 10:47:58 -04:00
chhylp123 626787ab8a complex cleaning 2021-05-20 17:03:18 -04:00
chhylp123 5c1680e998 fix missed ug when bubble popping 2021-05-19 10:16:23 -04:00
chhylp123 b12e008416 new somatic variant popping 2021-05-19 09:52:40 -04:00
chhylp123 be8e1e3117 sc debug 2021-05-17 00:12:41 -04:00
chhylp123 2bbac713ef init scaffold 2021-05-15 11:45:05 -04:00
chhylp123 4105dd360e correction 2021-05-11 13:01:06 -04:00
Heng Li 1f7d3f46c9 removed clang 2021-05-10 22:23:22 -04:00
Heng Li d4cc3551e8 added code of conduct 2021-05-10 21:49:48 -04:00
Heng Li 8187f177ec Merge branch 'master' of github.com:chhylp123/hifiasm 2021-05-10 21:48:31 -04:00