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24 Commits

Author SHA1 Message Date
chhylp123
40e2a48706 Merge pull request #535 from chhylp123/hifiasm_dev_debug
add scaffolding
2023-10-10 12:41:10 -04:00
chhylp123
e974b22ac0 Merge pull request #521 from chhylp123/hifiasm_dev_debug
checkpoint for scaffolding
2023-09-15 13:00:13 -04:00
chhylp123
94a284b430 Merge pull request #503 from chhylp123/hifiasm_dev_debug
disable multiple assertions
2023-08-17 19:59:13 -04:00
chhylp123
30d2ee065e Merge pull request #482 from chhylp123/hifiasm_dev_debug
fix filter_short_ulalignments
2023-07-19 19:12:10 -04:00
chhylp123
d91fc50058 Merge pull request #462 from chhylp123/hifiasm_dev_debug
trio-dual/bug for hic phasing
2023-05-31 14:55:16 -04:00
chhylp123
abff5fae04 Merge pull request #457 from chhylp123/hifiasm_dev_debug
remove ksw2 from makefile
2023-05-12 20:57:45 -04:00
chhylp123
2cc990ed22 Merge pull request #455 from chhylp123/hifiasm_dev_debug
fix memory leak of print_utg
2023-05-12 11:32:03 -04:00
chhylp123
5bddae4ae9 Merge pull request #446 from chhylp123/hifiasm_dev_debug
fixed missing/false duplication for diploid asm
2023-04-17 19:58:31 -04:00
chhylp123
fbfcf72eb3 Merge pull request #445 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-04-14 16:44:10 -04:00
chhylp123
b49b4a6cc7 Merge pull request #438 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-04-06 23:18:26 -04:00
chhylp123
00959dfdd9 Merge pull request #430 from chhylp123/hifiasm_dev_debug
0.19.2->0.19.3
2023-03-22 12:26:41 -04:00
chhylp123
00ad7458c3 Merge pull request #429 from chhylp123/hifiasm_dev_debug
avoid misassemblies; better polyploidy graph
2023-03-22 12:24:31 -04:00
chhylp123
b763e1ff76 Merge pull request #422 from chhylp123/hifiasm_dev_debug
disable postjoin for the ul assembly
2023-03-13 15:44:45 -04:00
chhylp123
7bb366688e Merge pull request #421 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-03-13 11:14:38 -04:00
chhylp123
f69166ee3b Merge pull request #420 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-03-10 23:44:34 -05:00
chhylp123
fa663a9680 Merge pull request #419 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-03-10 19:34:50 -05:00
chhylp123
8a00c6c5f4 Merge pull request #414 from chhylp123/hifiasm_dev_debug
better resolution for complex regions
2023-02-27 09:36:46 -05:00
chhylp123
ad4ff5550b Merge pull request #411 from chhylp123/hifiasm_dev_debug
bug fixed for mask calculation
2023-02-24 00:37:36 -05:00
chhylp123
dd5f368fe6 Merge pull request #409 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-02-21 20:23:31 -05:00
chhylp123
27f77dca29 Merge pull request #401 from chhylp123/hifiasm_dev_debug
0.18.6 -> 0.18.7
2023-02-20 23:42:20 -05:00
chhylp123
026cf97d61 Merge pull request #400 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-02-16 00:09:39 -05:00
chhylp123
1dd82e7729 Merge pull request #387 from chhylp123/hifiasm_dev_debug
r500
2023-01-23 15:29:16 -05:00
chhylp123
6c91e8b0a7 Merge pull request #386 from chhylp123/hifiasm_dev_debug
Hifiasm dev debug
2023-01-23 15:26:38 -05:00
chhylp123
7280f132b1 Merge pull request #383 from chhylp123/hifiasm_dev_debug
Merge pull request #348 from chhylp123/master
2023-01-17 10:28:29 -05:00

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