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Haoyu Cheng 63509bcb7f Accelerate overlap merge
2019-05-18 11:36:42 -04:00
.vscode
Accelerate overlap merge
2019-05-18 11:36:42 -04:00
Assembly.cpp
Accelerate overlap merge
2019-05-18 11:36:42 -04:00
Assembly.h
Merge overlap
2019-05-18 01:03:24 -04:00
CommandLines.cpp
S/L index&reads
2019-05-16 21:14:50 -04:00
CommandLines.h
S/L index&reads
2019-05-16 21:14:50 -04:00
Hash_Table.cpp
Accelerate overlap merge
2019-05-18 11:36:42 -04:00
Hash_Table.h
Accelerate overlap merge
2019-05-18 11:36:42 -04:00
ketopt.h
Using klib
2019-05-10 16:14:01 -04:00
khash.h
S/L index&reads
2019-05-16 21:14:50 -04:00
kmer.cpp
Reduce memory requirement
2019-05-16 00:22:20 -04:00
kmer.h
Merge overlap
2019-05-18 01:03:24 -04:00
kseq.h
Update position hash table
2019-05-14 17:02:03 -04:00
LICENSE
Initial commit
2019-05-09 15:34:58 -04:00
main.cpp
Merge overlap
2019-05-18 01:03:24 -04:00
Makefile
Finish multiple thread counting
2019-05-12 02:16:20 -04:00
Process_Read.cpp
Fix bug
2019-05-17 00:52:10 -04:00
Process_Read.h
Fix bug
2019-05-17 00:52:10 -04:00
README.md
test README
2019-05-09 16:05:32 -04:00

README.md

Long_read_assembly

##test

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Description
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
bioinformaticsdenovo-assemblygenomicshifi-readpacbio
Readme MIT 21 MiB
Languages
C++ 93.2%
C 6.5%
Roff 0.2%