Files
hifiasm/main.cpp
chhylp123 69d0e18fe5 ed macro
2022-09-14 15:38:55 -04:00

39 lines
1.5 KiB
C++

#include <stdio.h>
#include <stdlib.h>
#include "CommandLines.h"
#include "Process_Read.h"
#include "Assembly.h"
#include "Levenshtein_distance.h"
#include "htab.h"
int main(int argc, char *argv[])
{
int i, ret;
yak_reset_realtime();
init_opt(&asm_opt);
if (!CommandLine_process(argc, argv, &asm_opt)) return 0;
//bit_extz_t exz; ///ed_band_cal_global_128bit(t_string+r_ts, t_end+1-r_ts, q_string, ql, thres, &exz);
// ed_band_cal_extension_128bit((char *)"AAGTTTA", 7, (char *)"CCTTTTTT", 8, 4, &exz);
// ed_band_cal_extension_128bit((char *)"AA", 2, (char *)"ACTTTTTT", 8, 1, &exz);
// fprintf(stderr, "ed_extension::%d, pe::%d, te::%d\n", exz.err, exz.pe, exz.te);
// exit(1);
// fprintf(stderr, "[M::%s::] ed_global::%d, ed_global_128bit::%d\n", __func__,
// ed_band_cal_global((char *)"ACT", 3, (char *)"AAT", 3, 1),
// ed_band_cal_global_128bit((char *)"ACT", 3, (char *)"AAT", 3, 1));
// fprintf(stderr, "[M::%s::] ed_global::%d, ed_global_128bit::%d\n", __func__,
// ed_band_cal_global((char*)"ACTTTTTT", 8, (char*)"AATTTT", 6, 3),
// ed_band_cal_global_128bit((char*)"ACTTTTTT", 8, (char*)"AATTTT", 6, 3));
// exit(1);
ret = ha_assemble();
destory_opt(&asm_opt);
fprintf(stderr, "[M::%s] Version: %s\n", __func__, HA_VERSION);
fprintf(stderr, "[M::%s] CMD:", __func__);
for (i = 0; i < argc; ++i)
fprintf(stderr, " %s", argv[i]);
fprintf(stderr, "\n[M::%s] Real time: %.3f sec; CPU: %.3f sec; Peak RSS: %.3f GB\n", __func__, yak_realtime(), yak_cputime(), yak_peakrss_in_gb());
return ret;
}