Switch demo datasets to launch directly from URL

This commit is contained in:
Sidney Bell
2019-11-22 11:26:51 -08:00
parent 621b88bff4
commit 5ed9f5126b

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@@ -5,8 +5,7 @@ description: Demo datasets
---
# Example datasets
**To download and use these datasets, run:**
`unzip [filename.zip]`
**To use these datasets, run:**
`cellxgene launch [filename.h5ad] --open`
### Peripheral blood mononuclear cells
@@ -17,7 +16,10 @@ Healthy human PBMCs (10X).
- File size: 19MB
- [Raw data](http://cf.10xgenomics.com/samples/cell-exp/1.1.0/pbmc3k/pbmc3k_filtered_gene_bc_matrices.tar.gz)
- [Processing](https://github.com/chanzuckerberg/cellxgene-vignettes/blob/master/dataset-processing/pbmc3k-processing.ipynb)
- [Download](https://cellxgene-example-data.czi.technology/pbmc3k.h5ad.zip)
- Launch:
```
cellxgene launch https://cellxgene-example-data.czi.technology/pbmc3k.h5ad
```
### Tabula muris
20 organs and tissues from healthy mice (Smart-Seq2).
@@ -28,7 +30,10 @@ Rich metadata and annotations.
- File size: 174MB
- [Raw data](https://figshare.com/projects/Tabula_Muris_Transcriptomic_characterization_of_20_organs_and_tissues_from_Mus_musculus_at_single_cell_resolution/27733)
- [Processing](https://github.com/chanzuckerberg/cellxgene-vignettes/blob/master/dataset-processing/tabula-muris-processing.ipynb)
- [Download](https://cellxgene-example-data.czi.technology/tabula-muris.h5ad.zip)
- Launch:
```
cellxgene launch https://cellxgene-example-data.czi.technology/tabula-muris.h5ad
```
### Tabula muris senis
22 organs and tissues from healthy mice at ages 3mo, 18mo, 21mo, and 24mo (Smart-Seq2).
@@ -39,4 +44,7 @@ Rich metadata and annotations.
- File size: 3.9GB
- Raw data [geo link coming soon!]
- [Processing](https://www.biorxiv.org/content/10.1101/661728v1)
- [Download](https://cellxgene-example-data.czi.technology/tabula-muris-senis.h5ad.zip)
- Launch:
```
cellxgene launch https://cellxgene-example-data.czi.technology/tabula-muris-senis.h5ad
```