Simplify demo data download

This commit is contained in:
Sidney Bell
2019-11-21 18:51:30 -08:00
parent ecedf666c7
commit 621b88bff4
+3 -4
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@@ -6,7 +6,6 @@ description: Demo datasets
# Example datasets
**To download and use these datasets, run:**
`curl -O [URL]`
`unzip [filename.zip]`
`cellxgene launch [filename.h5ad] --open`
@@ -18,7 +17,7 @@ Healthy human PBMCs (10X).
- File size: 19MB
- [Raw data](http://cf.10xgenomics.com/samples/cell-exp/1.1.0/pbmc3k/pbmc3k_filtered_gene_bc_matrices.tar.gz)
- [Processing](https://github.com/chanzuckerberg/cellxgene-vignettes/blob/master/dataset-processing/pbmc3k-processing.ipynb)
- Download: `curl -O https://cellxgene-example-data.czi.technology/pbmc3k.h5ad.zip`
- [Download](https://cellxgene-example-data.czi.technology/pbmc3k.h5ad.zip)
### Tabula muris
20 organs and tissues from healthy mice (Smart-Seq2).
@@ -29,7 +28,7 @@ Rich metadata and annotations.
- File size: 174MB
- [Raw data](https://figshare.com/projects/Tabula_Muris_Transcriptomic_characterization_of_20_organs_and_tissues_from_Mus_musculus_at_single_cell_resolution/27733)
- [Processing](https://github.com/chanzuckerberg/cellxgene-vignettes/blob/master/dataset-processing/tabula-muris-processing.ipynb)
- Download: `curl -O https://cellxgene-example-data.czi.technology/tabula-muris.h5ad.zip`
- [Download](https://cellxgene-example-data.czi.technology/tabula-muris.h5ad.zip)
### Tabula muris senis
22 organs and tissues from healthy mice at ages 3mo, 18mo, 21mo, and 24mo (Smart-Seq2).
@@ -40,4 +39,4 @@ Rich metadata and annotations.
- File size: 3.9GB
- Raw data [geo link coming soon!]
- [Processing](https://www.biorxiv.org/content/10.1101/661728v1)
- Download: `curl -O https://cellxgene-example-data.czi.technology/tabula-muris-senis.h5ad.zip`
- [Download](https://cellxgene-example-data.czi.technology/tabula-muris-senis.h5ad.zip)