rwbaber
5ac256fc8b
fix: remove incompatible float16 fixture from general adaptor tests ( #2746 )
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* test: remove incompatible float16 fixture from generic adaptor tests
* test: remove obsolete error test file for float16
2026-01-15 15:18:45 -08:00
Ronen
487bd13ff8
chore: add support for python 3.12 ( #2694 )
2024-09-12 14:16:46 -04:00
Timmy Huang
7bf5add6ef
chore: Fix compatibility tests ( #2685 )
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* chore: Fix compatibility tests
* DEBUGGGG
* fix: update deps, fix unit tests
* fix: FE deps
* chore: update compatibility matrix
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Co-authored-by: kaloster <rkalo@contractor.chanzuckerberg.com >
2024-09-05 09:26:40 -07:00
atarashansky
6505f6cbf5
chore: upgrade backend dependencies ( #2641 )
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chore: upgrade backend dependencies (#2641 )
2023-11-29 14:16:39 -08:00
Andrew Tolopko
ddb601c103
feat: annotate command improvements ( #2568 )
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* Replace --input-h5ad-file with a positional argument, for consistency with other CLI commands
* Replace --update-h5ad-file with --overwrite, for consistency with `prepare` command.
* Fix/clarify various help descriptions
* Fix final output message when input file is overwritten
* Fix annotate top-level help description
2022-09-15 11:55:58 -04:00
atarashansky
ff5da77372
fix unit tests ( #2562 )
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Co-authored-by: atarashansky <atarashansky@CZIMACOS3990.local >
2022-08-25 08:02:58 -07:00
Andrew Tolopko
a9ef01a6f9
fix test ( #2549 )
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address issues building mlflow model in GHA test env
2022-07-29 11:17:04 -04:00
Andrew Tolopko
03d9e8e6aa
fix unit test
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avoid performing pip installs for mlflow-based tests
2022-07-29 09:57:55 -04:00
Andrew Tolopko
30e19e47c6
feat: add cli annotation subcommand ( #2539 )
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add `cellxgene annotate` subcommand for invoking MLflow model to generate new `obs` annotations, initially intended for cell type annotations.
2022-07-29 05:15:54 -07:00
Andrew Tolopko
06da05eb9f
skip failing tests to unblock adding of new features ( #2545 )
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skipped tests will be reinstated in future issues
2022-07-28 15:11:36 -04:00
Ben MR
8bac98f25c
Fix float16 support [ #2379 ] ( #2483 )
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* Fix float16 support [#2379 ]
Convert to float32 on startup unless backed, in which case error. scipy does not support complex slicing from float16 data so this is the easiest fix for now.
* minor msg change
2022-02-10 15:20:47 -08:00
Madison Dunitz
3ebbb0ccbf
move common code into server, update tests and makefile ( #2425 )
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* move common code into server, update tests and makefile
remove backend directory, refactor
update smoke tests
2021-09-20 18:50:06 -07:00
Colin Megill
1a16377880
Remove react router
2017-10-04 01:06:24 -07:00
Colin Megill
f6d7cc3e23
initial commit
2017-08-23 16:28:01 -07:00
