atarashansky
6505f6cbf5
chore: upgrade backend dependencies ( #2641 )
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chore: upgrade backend dependencies (#2641 )
2023-11-29 14:16:39 -08:00
Andrew Tolopko
ddb601c103
feat: annotate command improvements ( #2568 )
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* Replace --input-h5ad-file with a positional argument, for consistency with other CLI commands
* Replace --update-h5ad-file with --overwrite, for consistency with `prepare` command.
* Fix/clarify various help descriptions
* Fix final output message when input file is overwritten
* Fix annotate top-level help description
2022-09-15 11:55:58 -04:00
Andrew Tolopko
a9ef01a6f9
fix test ( #2549 )
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address issues building mlflow model in GHA test env
2022-07-29 11:17:04 -04:00
Andrew Tolopko
03d9e8e6aa
fix unit test
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avoid performing pip installs for mlflow-based tests
2022-07-29 09:57:55 -04:00
Andrew Tolopko
30e19e47c6
feat: add cli annotation subcommand ( #2539 )
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add `cellxgene annotate` subcommand for invoking MLflow model to generate new `obs` annotations, initially intended for cell type annotations.
2022-07-29 05:15:54 -07:00
Madison Dunitz
3ebbb0ccbf
move common code into server, update tests and makefile ( #2425 )
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* move common code into server, update tests and makefile
remove backend directory, refactor
update smoke tests
2021-09-20 18:50:06 -07:00
