10 Commits

Author	SHA1	Message	Date
Andrew Tolopko	ddb601c103	feat: annotate command improvements (#2568) ... * Replace --input-h5ad-file with a positional argument, for consistency with other CLI commands * Replace --update-h5ad-file with --overwrite, for consistency with `prepare` command. * Fix/clarify various help descriptions * Fix final output message when input file is overwritten * Fix annotate top-level help description	2022-09-15 11:55:58 -04:00
atarashansky	ff5da77372	fix unit tests (#2562) ... Co-authored-by: atarashansky <atarashansky@CZIMACOS3990.local>	2022-08-25 08:02:58 -07:00
Andrew Tolopko	a9ef01a6f9	fix test (#2549) ... address issues building mlflow model in GHA test env	2022-07-29 11:17:04 -04:00
Andrew Tolopko	03d9e8e6aa	fix unit test ... avoid performing pip installs for mlflow-based tests	2022-07-29 09:57:55 -04:00
Andrew Tolopko	30e19e47c6	feat: add cli annotation subcommand (#2539) ... add `cellxgene annotate` subcommand for invoking MLflow model to generate new `obs` annotations, initially intended for cell type annotations.	2022-07-29 05:15:54 -07:00
Andrew Tolopko	06da05eb9f	skip failing tests to unblock adding of new features (#2545) ... skipped tests will be reinstated in future issues	2022-07-28 15:11:36 -04:00
Ben MR	8bac98f25c	Fix float16 support [#2379] (#2483) ... * Fix float16 support [#2379] Convert to float32 on startup unless backed, in which case error. scipy does not support complex slicing from float16 data so this is the easiest fix for now. * minor msg change	2022-02-10 15:20:47 -08:00
Madison Dunitz	3ebbb0ccbf	move common code into server, update tests and makefile (#2425) ... * move common code into server, update tests and makefile remove backend directory, refactor update smoke tests	2021-09-20 18:50:06 -07:00
Colin Megill	1a16377880	Remove react router	2017-10-04 01:06:24 -07:00
Colin Megill	f6d7cc3e23	initial commit	2017-08-23 16:28:01 -07:00