Commit Graph
4 Commits
Author SHA1 Message Date
bmccandless bbfd2e5ac5 Add a simple annotations cache to the server (#1220)
Reading the user annotations had a performance problem.
The same file was read over and over.  Now, the last set of user
annotations are cached.
2020-03-12 20:06:44 -07:00
bmccandlessandbkmartinjr b3e9719602 hosted cellxgene (#38) (#1200)
* early, non-working eb config

* hosted cellxgene

In this PR, contains scripts and instructions for deploying cellxgene
for AWS elastic beanstalk.  It supports the multi-dataset option.

The Makefile in the server/eb directory creates an artifact.zip
file, which can be deploy at AWS EB.

The server/eb directory contains:
  app.py - flask app to run the server
  Makefile - which creates an artifact.zip file which can be deployed.
  README.md - instructions for setting up and deploying the eb app.

* hosted cellxgene (#38)

In this PR, contains scripts and instructions for deploying cellxgene
for AWS elastic beanstalk.  It supports the multi-dataset option.

The Makefile in the server/eb directory creates an artifact.zip
file, which can be deploy at AWS EB.

The server/eb directory contains:
  app.py - flask app to run the server
  Makefile - which creates an artifact.zip file which can be deployed.
  README.md - instructions for setting up and deploying the eb app.

* Update how artifact.zip is created

prune the server/test and server/eb directories

* Remove debugging print statements

* fixes from review comments

* fix lint

Co-authored-by: bkmartinjr <bruce@chanzuckerberg.com>
2020-03-09 12:08:07 -07:00
bmccandless 87efcc0e99 Fix a few bugs from server refactor (#1188)
- Fixes #1185 port command line argument was not handle correctly
 - Fixes #1184 was not catching the "DatasetAccessError" exception.
2020-03-02 11:55:57 -08:00
bmccandless 46876e2fb1 Fix various bugs with CXG format at annotations (#1173)
- Enable testing for this path

 - Fixes #1166
 - Fixes #1167
 - Fixes #1168
2020-02-24 18:19:39 -08:00