Commit Graph

7 Commits

Author SHA1 Message Date
Bruce Martin
de44739f8b add fsspec support to gene set and cell annotations (#2512) 2022-04-20 18:18:47 -07:00
Madison Dunitz
3ebbb0ccbf move common code into server, update tests and makefile (#2425)
* move common code into server, update tests and makefile

remove backend directory, refactor

update smoke tests
2021-09-20 18:50:06 -07:00
Madison Dunitz
78c9d24ed4 Refactor czi_hosted and server into backend directory, pull common code into backend/common, refactor tests (#2102)
* move local_server -> backend/server server-> backend/czi_hosted, pull common code into backend/common update imports, tests and make commands
2021-03-26 00:27:07 -05:00
Bruce Martin
e6281baa39 improve error message for OBO parse failure (#2053) 2021-02-05 12:19:40 -08:00
Madison Dunitz
65ea1b673f Dunitz 1685 hosted annotations (#1789)
* save tiledb array to s3, dont cache user annotations

* Add option to disable annotation filename prompt (#1787)

Co-authored-by: Madison Dunitz <dunitzm@gmail.com>

* set tiledb default context in cxg_adaptor

Co-authored-by: maniarathi <arathi.mani@chanzuckerberg.com>
Co-authored-by: Severiano Badajoz <sbadajoz@chanzuckerberg.com>
2020-08-24 18:26:08 -05:00
maniarathi
508889f74b Refactoring cxg utility classes in preparation for CXG conversion tooling (#1739) 2020-08-14 16:51:13 -07:00
Madison Dunitz
2689d8d2c0 Create hosted user annotations [1685] (#1726)
* add function to retrieve latest annotation from db, db updates

* read and write tiledb arrays

* adding tests
2020-08-13 19:07:17 -05:00