Commit Graph
9 Commits
Author SHA1 Message Date
Marcus Kinsella f77038ad58 Permit other keys in the cxguser cookie (#1982) 2020-11-18 17:58:33 -08:00
Marcus Kinsella e892e64685 Convert HGNC ids to their symbol (#1972)
There are entries in some var indexes like HGNC:18790. We'd like to convert that to its symbol, NSG1.
2020-11-06 09:27:49 -08:00
Marcus Kinsellaandmaniarathi 39a1124c35 Fix manifest to include schema definitions (#1965)
🤦

Co-authored-by: maniarathi <mani.arathi@gmail.com>
2020-11-05 09:41:05 -08:00
Marcus Kinsella 78176f9711 Add schema subcommand (#1939)
Add the `cellxgene schema apply` and `cellxgene schema validate` subcommands.

The first takes an h5ad file and a yaml with config information and produces a new h5ad that follows the cellxgene data integration schema.

The second takes an h5ad and checks if it follows the schema version written into its metadata.

Both are currently marked as "experimental" as the primary intended users are still at CZI.
2020-11-02 08:26:37 -08:00
Marcus Kinsella 550847f763 Add dataset 29 (#1712) 2020-08-04 16:03:44 -07:00
Marcus Kinsella 6bda27f554 Add datasets 45-47 (#1706) 2020-08-04 11:07:08 -07:00
Marcus Kinsella 2b90c747f5 Fix readme images on PyPi (#467)
But this time actually do that
2018-11-26 15:27:05 -08:00
Marcus Kinsella 2b4aa92f67 Use externally-reachable image urls (#453)
This is needed for the images to show up in pypi.
2018-11-16 13:02:49 -08:00
Marcus Kinsella 523048de43 Set long_description_content_type (#439)
This _should_ make it look more attractive on pypi.
2018-11-15 11:19:34 -08:00