mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-28 17:38:12 +08:00
21 lines
840 B
Markdown
21 lines
840 B
Markdown
# cellxgene
|
|
|
|
cellxgene is an interactive data explorer for single-cell transcriptomics data designed to handle large datasets (1 million cells or more) and integrate with your favorite analysis tools
|
|
|
|
## getting started
|
|
|
|
install the package
|
|
> `> pip install cellxgene`
|
|
|
|
preprocess the data for use with cellxgene (optional)
|
|
> `> cellxgene --prepare dataset.h5ad -o processed.h5ad`
|
|
|
|
launch the web app
|
|
> `> cellxgene --launch processed.h5ad`
|
|
|
|
## features
|
|
|
|
### help and contact
|
|
|
|
Have questions, suggestions, or comments? You can come hang out with us by joining the [CZI Science Slack](https://join-cziscience-slack.herokuapp.com/) and posting in the `#cellxgene-users` channel. As mentioned above, please submit any feature requests or bugs as [Github issues](https://github.com/chanzuckerberg/cellxgene/issues). We'd love to hear from you!
|