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r109: changed the default scoring

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Heng Li
2017-06-29 20:21:57 -04:00
parent 4cd456b9ba
commit 08cbb09fcc
2 changed files with 2 additions and 2 deletions
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2
main.c
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@@ -10,7 +10,7 @@
#include "minimap.h"
#include "mmpriv.h"
#define MM_VERSION "2.0-r108-pre"
#define MM_VERSION "2.0-r109-pre"
void liftrlimit()
{

2
map.c
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@@ -28,7 +28,7 @@ void mm_mapopt_init(mm_mapopt_t *opt)
opt->max_join_short = 2000;
opt->min_join_flank_sc = 1000;
opt->a = 1, opt->b = 1, opt->q = 1, opt->e = 1;
opt->a = 1, opt->b = 2, opt->q = 2, opt->e = 1;
opt->zdrop = 100;
opt->min_dp_score = 0;
opt->min_ksw_len = 100;