r109: changed the default scoring

2026-09-22 05:28:12 +08:00 · 2017-06-29 20:21:57 -04:00
parent 4cd456b9ba
commit 08cbb09fcc
2 changed files with 2 additions and 2 deletions
@@ -28,7 +28,7 @@ void mm_mapopt_init(mm_mapopt_t *opt)
 	opt->max_join_short = 2000;
 	opt->min_join_flank_sc = 1000;

-	opt->a = 1, opt->b = 1, opt->q = 1, opt->e = 1;
+	opt->a = 1, opt->b = 2, opt->q = 2, opt->e = 1;
 	opt->zdrop = 100;
 	opt->min_dp_score = 0;
 	opt->min_ksw_len = 100;