15 Commits

Author	SHA1	Message	Date
Heng Li	205eadf346	r334: ignore a high-occ seed in a small window	2021-01-23 16:25:52 -05:00
Heng Li	da672118e5	r330: unimap heuristic for mz sampling	2021-01-21 11:05:37 -05:00
Heng Li	02f0b5dd22	r329: a bit code cleanup	2020-11-03 00:44:15 -05:00
Heng Li	dcb583bd69	r328: use binomial heap for general cases	2020-11-01 22:49:06 -05:00
Heng Li	6fa4d44426	r327: choose up to 3 high-freq minimizers	2020-11-01 10:44:02 -05:00
Heng Li	f02eb66e6a	r326: select high-occ k-mers (experimental)	2020-10-29 22:36:54 -04:00
Heng Li	f37c4e29fa	a bit refactoring for the next change	2020-10-29 18:24:47 -04:00
Heng Li	ef8c047559	removed unused ha_sketch	2020-10-29 11:28:43 -04:00
chhylp123	e5d503ea65	update polishing	2020-10-19 13:22:45 -04:00
chhylp123	89fcb35a64	for debugging	2020-10-11 14:32:33 -04:00
chhylp123	03cf0d475c	save bfore multiple overlaps	2020-08-23 08:46:33 -04:00
Heng Li	716713685c	renamed files for code cleanup	2020-03-25 19:59:17 -04:00
Heng Li	585bbbe213	a bit code cleanup	2020-03-25 10:31:38 -04:00
Heng Li	84361ba6dd	dense minimizer apparently works	2020-03-24 23:05:38 -04:00
Heng Li	3341cf20ba	backup	2020-03-24 21:57:23 -04:00