xxay/hifiasm
1
0
Fork 0
mirror of https://github.com/chhylp123/hifiasm.git synced 2026-10-11 07:50:55 +08:00
Code Issues Packages Projects Releases Wiki Activity
150 Commits 11 Branches 54 Tags
e116f6e09de7a9cce933e44d9505d138ed21bd99
Commit Graph
29 Commits
This Branch
This Branch
All Branches
Author SHA1 Message Date
Heng Li e116f6e09d position table; unfinished 2020-03-25 19:17:07 -04:00
Heng Li 585bbbe213 a bit code cleanup 2020-03-25 10:31:38 -04:00
Heng Li f8351e557a counting minimizers exactly 2020-03-25 09:50:32 -04:00
Heng Li 3e897560c4 minimizer filtering apparently works 2020-03-25 00:38:13 -04:00
Heng Li 84361ba6dd dense minimizer apparently works 2020-03-24 23:05:38 -04:00
Heng Li 3341cf20ba backup 2020-03-24 21:57:23 -04:00
Heng Li f70257c260 support HPC k-mer 2020-03-24 19:58:21 -04:00
Heng Li ec750cdd7d NOT WORKING! find hom and het peaks 2020-03-24 18:50:52 -04:00
Heng Li 2a848d254a k-mer histogram 2020-03-24 16:02:23 -04:00
Heng Li 64edb06e08 NOT WORKING!!! added all k-mer counter 2020-03-24 12:29:46 -04:00
Heng Li 398e73022b NOT WORKING!!! removed small_hash_table 2020-03-24 00:57:00 -04:00
Heng Li 59a9d62df9 NOT WORKING!!! backup only 2020-03-24 00:44:56 -04:00
Heng Li e6ef2fb56f put the rev bit on readID 2020-03-23 10:55:30 -04:00
Heng Li 3a27d104c6 replaced khash with khashl 2020-03-23 10:21:46 -04:00
Heng Li cfb0a5c8ec reduced the position to 32 bits 2020-03-23 09:54:42 -04:00
Heng Li 8b36dcb3d3 description of the output 2020-01-04 12:56:06 -05:00
Heng Li 1e71947a23 bumped version number to 0.1.0 2019-12-30 12:20:07 -05:00
Heng Li 4ea12b651f fixed a typo 2019-12-30 12:17:15 -05:00
Heng Li 3a61b1b0b0 changed the output file names 2019-12-30 12:01:54 -05:00
Heng Li 30eddefc57 main() should return 0 on success 2019-12-30 10:44:13 -05:00
Heng Li b7117af560 TAB to SPACE 2019-12-26 10:14:14 -05:00
Heng Li b787ebe195 TAB to SPACEs 2019-12-26 10:11:44 -05:00
Heng Li e6cdac9ea9 fixed a few harmless warnings 2019-12-26 10:06:58 -05:00
Heng Li 7fb4646beb added gitignore 2019-12-26 09:41:15 -05:00
Heng Li 03c8899a34 fixed clang warnings 2019-12-26 09:40:35 -05:00
Heng Li db7e31f90d Merge branch 'master' into new-mak 2019-11-22 15:01:28 -05:00
Heng Li cb3eecc5e0 added klib_unused to suppress kseq warnings 2019-11-22 14:47:54 -05:00
Heng Li 8ad76667f4 new Makefile 2019-11-22 14:43:37 -05:00
Heng Li b81b7f9213 Fixed a compiling error caused by UINT32_MAX 2019-11-22 14:36:37 -05:00