22 Commits

Include renames

Author	SHA1	Message	Date
chhylp123	e53fc786bd	fix slow running time vs r726	2026-03-27 15:37:44 -04:00
chhylp123	aa4d12b1c6	simd version 0	2026-03-24 17:54:36 -04:00
chhylp123	9a2884f518	backup avx	2026-03-20 16:06:06 -04:00
chhylp123	5e5a1568ed	error est funcion	2026-03-17 17:27:48 -04:00
chhylp123	c0478830e6	err_estimate	2026-03-01 08:51:53 -05:00
chhylp123	2fa4ef224f	updating final overlapping	2026-02-17 18:07:49 -05:00
chhylp123	86311effb9	running time bug fixed	2026-02-16 10:46:28 -05:00
chhylp123	53e1b150c3	bug fixed for memory leak	2026-02-12 16:47:32 -05:00
chhylp123	d6ba102d42	r852 -> hybrid correction	2026-02-11 16:38:27 -05:00
chhylp123	b3b18ab1d0	r721	2025-03-14 01:40:21 -04:00
chhylp123	a96191560e	eliminate SVs	2025-03-10 16:09:02 -04:00
chhylp123	2c77b3c87e	ont overlapping	2024-12-21 03:17:17 -05:00
chhylp123	3067771783	update for low coverge data	2024-12-16 06:25:31 -05:00
chhylp123	4889f1c6d8	fix high-coverage issue for ONT	2024-12-07 20:02:57 -05:00
chhylp123	184eb0a9fe	fix the memory issue	2024-12-06 05:17:30 -05:00
chhylp123	676385cf8e	ont simplex support	2024-11-27 13:27:13 -05:00
chhylp123	80fa5ed436	ONT EC	2024-11-12 23:53:29 -05:00
chhylp123	6de4e14782	update before fly HPC	2024-10-29 14:59:52 -04:00
chhylp123	ade800990e	update for reference read hpc	2024-10-27 13:22:06 -04:00
chhylp123	49dd83df2a	fix memory issue	2024-10-13 18:47:05 -04:00
chhylp123	e8b18560a5	0.20.0-r631	2024-10-09 17:09:10 -04:00
chhylp123	d5f8a8a6c0	new ec model	2024-06-30 19:53:51 -04:00