xxay/hifiasm
1
0
Fork 0
mirror of https://github.com/chhylp123/hifiasm.git synced 2026-10-01 17:28:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

test readme

Browse Source
This commit is contained in:
Haoyu Cheng
2019-12-26 14:31:00 -05:00
parent 53d1692331
commit dc67fc6d2b
1 changed files with 8 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files
README.md
+8 -2
View File
@@ -1,3 +1,9 @@
# Long_read_assembly
## Getting Started
##test
```sh
# Install hifiasm and miniasm (requiring g++ and zlib)
git clone https://github.com/chhylp123/hifiasm.git
cd hifiasm && make
# Assembly (corrected reads are at NA12878.asm.fa, assembly graph is at NA12878.asm.fa.gfa)
./hifiasm -w -l -q NA12878.fq.gz -o NA12878.asm.fa -k 40 -t 32 -r 2 -a 4 -z 0
```