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Code Issues Packages Projects Releases Wiki Activity
374 Commits 11 Branches 54 Tags
doc-update
Commit Graph
44 Commits
Author SHA1 Message Date
chhylp123 f8ee584291 code clean 2021-04-16 20:28:48 -04:00
chhylp123 1e86e3dc02 best flipping 2021-04-14 18:50:20 -04:00
chhylp123 67c7218264 fix distance bug 2021-04-13 01:18:49 -04:00
chhylp123 36afbce9bc update unitig distance 2021-04-12 04:54:06 -04:00
chhylp123 7235f6426f back_up_hic 2021-04-11 10:59:26 -04:00
chhylp123 8f733750c4 variant calling 2021-04-10 21:58:53 -04:00
chhylp123 3218618bb4 keep k_trans 2021-04-08 23:58:12 -04:00
chhylp123 1a6f386823 backup trans_chain 2021-04-04 20:27:19 -04:00
chhylp123 8e75eb5a05 keep l1 trans 2021-04-04 14:00:28 -04:00
chhylp123 ebfc04d253 clean purge_dups 2021-04-03 16:26:58 -04:00
chhylp123 46e899bbae backup r321 2021-04-01 21:02:57 -04:00
chhylp123 0605aa1961 r317 2021-03-27 02:46:48 -04:00
chhylp123 24a19d7976 more accurate purging 2021-03-26 18:07:30 -04:00
chhylp123 d89a630ff3 update contig flipping 2021-03-25 03:03:19 -04:00
chhylp123 98a04c168a update r313 2021-03-18 05:26:33 -04:00
chhylp123 8e4b98f0a6 bubble label 2021-03-14 03:25:19 -04:00
chhylp123 4c2ce6fc6b update trans chain 2021-03-10 22:46:50 -05:00
chhylp123 8aa87fdce8 purge_dups for high het 2021-03-08 20:52:11 -05:00
chhylp123 d2ca12604b update r312 2021-02-14 14:17:43 -05:00
chhylp123 d2bf15eba4 update r311 2021-02-14 13:32:02 -05:00
chhylp123 c47a1df4b0 fix chain bug 2021-02-14 12:47:51 -05:00
chhylp123 8855604d99 fix chain bug 2021-02-14 12:45:37 -05:00
chhylp123 8467d58ef1 for v0.14 2021-02-09 13:00:23 -05:00
chhylp123 88f5b11f04 bubble graph 2021-01-01 04:50:42 -05:00
chhylp123 c545fd84c7 hic bubble 2020-12-29 09:15:44 -05:00
chhylp123 53a655d802 init partition 2020-12-26 19:01:24 -05:00
chhylp123 f3e390eee8 for hic 2020-12-17 02:53:31 -05:00
chhylp123 fda858f9e7 update coverage 2020-07-13 22:34:26 -04:00
chhylp123 c01b593d7c using coverage 2020-07-12 16:03:01 -04:00
chhylp123 a25c37ed89 update k-mer peaks 2020-07-07 13:20:25 -04:00
chhylp123 2e56ef7db5 apply coverage to purge_dups 2020-07-06 10:02:03 -04:00
chhylp123 7f6725ead3 expose purge_dups 2020-04-18 00:45:47 -04:00
Heng Li 2d985569f1 Merge branch 'master' into dev-lh3 2020-04-12 18:57:42 -04:00
chhylp123 57b16e9e1f fix warning 2020-04-12 17:46:30 -04:00
Heng Li c4397a9400 r226: more careful about ma_hit_t_alloc memory 2020-04-11 22:05:07 -04:00
chhylp123 20c6c1d2e6 update trio-binning 2020-04-10 23:32:15 -04:00
chhylp123 943b6947cb update purge_dup by LIS 2020-04-10 13:58:36 -04:00
chhylp123 a288415111 bug fixing for purge_dup 2020-04-08 16:55:04 -04:00
chhylp123 9cc563c7c6 do hap alignment in parallel 2020-04-07 11:18:28 -04:00
chhylp123 87fc103e63 fix small bug 2020-04-06 02:03:34 -04:00
Heng Li 31356f9e02 r197: added an assertion test/suppressed warnings 2020-04-05 12:22:28 -04:00
Heng Li 16a3d58dc9 r196: fixed a compiling error 2020-04-05 12:14:20 -04:00
Heng Li 5917aa2f36 Merge branch 'chain-tune' into merge2 2020-04-05 12:07:13 -04:00
chhylp123 ac3fcc339a for purge_dup 2020-04-05 11:10:56 -04:00