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Code Issues Packages Projects Releases Wiki Activity
485 Commits 11 Branches 54 Tags
239f087af074b0b398f20f5dc95be50cf013fbcd
Commit Graph
178 Commits
Author SHA1 Message Date
chhylp123 138610b049 ul coordinates fixed 2022-06-25 21:52:56 -04:00
chhylp123 0a8c064734 read alignment extension debugging 2022-06-24 18:07:15 -04:00
chhylp123 a82e05c9f2 fix gap alignment extention 2022-06-23 22:11:28 -04:00
chhylp123 8f1c59a5da all alignments have done/been improved 2022-05-16 20:58:29 -04:00
chhylp123 74ad15846e small bugs fixed 2022-05-14 22:07:55 -04:00
chhylp123 dd8888aa90 backup for memory issues 2022-05-05 19:35:06 -04:00
chhylp123 8a2bb0b112 memory debugging 2022-05-04 20:22:50 -04:00
chhylp123 e8399b18f1 fixed duplicated chaining issue 2022-05-03 17:35:43 -04:00
chhylp123 8138941a26 new realignment 2022-05-03 00:59:24 -04:00
chhylp123 fdf24d5589 fix memory bug/logic bug 2022-05-01 00:37:32 -04:00
chhylp123 3064e1373b better uovlp saving 2022-04-22 23:10:21 -04:00
chhylp123 9c6a3607d1 intergration correctio 2022-03-01 20:25:53 -05:00
chhylp123 0ce5a7ba5b integration/print het sites 2022-01-17 18:29:48 -05:00
chhylp123 b640289b19 better read phasing 2021-12-07 22:47:52 -05:00
chhylp123 1e2a9518e5 print dup log 2021-11-29 15:11:02 -05:00
chhylp123 763634e1a9 kpt_dup 2021-11-28 19:35:32 -05:00
chhylp123 cb320b88f3 debug ul 2021-10-10 13:37:32 -04:00
chhylp123 7dd4a848b9 debug graph 2021-09-26 13:51:13 -04:00
chhylp123 ab80851b94 mempcpy -> memcpy 2021-09-12 17:43:43 -04:00
chhylp123 5e84db0ec9 adjust skew weight 2021-09-10 17:18:48 -04:00
chhylp123 809ca18dda r373 2021-09-10 17:17:44 -04:00
chhylp123 17b5cb21d3 tmp macro 2021-08-30 09:30:48 -04:00
chhylp123 e230b3a55f 0.16.0 release 2021-08-22 21:58:00 -04:00
chhylp123 37b07e4d33 better seeding 2021-08-22 09:53:34 -04:00
chhylp123 bfff640a82 dp opt 2021-08-12 11:16:10 -04:00
chhylp123 6ea66e1290 resolve conflicts 2021-07-27 20:11:22 -04:00
chhylp123 0c81c341d5 update r351 2021-07-27 19:51:20 -04:00
chhylp123 3c8a933b8a Merge remote-tracking branch 'origin/dev-lh3' 2021-07-27 19:50:29 -04:00
chhylp123 321acb2d8a update for r350 2021-07-26 00:16:00 -04:00
chhylp123 b14f894160 seperate purgeing and hom peak 2021-07-25 11:23:06 -04:00
chhylp123 62b7418257 update 0.15.5 2021-07-22 00:59:52 -04:00
chhylp123 a531a4cbda debugging for huge datasets 2021-06-27 07:48:29 -04:00
chhylp123 0410662841 print misjoin debug 2021-06-23 09:49:44 -04:00
chhylp123 5a400af39d r342-misjoin 2021-06-19 14:09:09 -04:00
chhylp123 9dc530cbfb low hamming for sampels with low het rate 2021-06-09 20:10:50 -04:00
chhylp123 ca67e7a9b3 rollback 2021-05-31 18:16:20 -04:00
chhylp123 24e5453781 bug fix 2021-05-02 14:16:36 -04:00
chhylp123 9c205c8271 resove tangle by hic 2021-04-30 22:44:48 -04:00
chhylp123 71e91f3fc2 assgin disconnected parts 2021-04-28 20:27:43 -04:00
chhylp123 2fc2268268 phasing improvement 2021-04-27 21:35:49 -04:00
chhylp123 11430d6a3b r329 2021-04-25 14:50:36 -04:00
chhylp123 e52e897113 clean code 2021-04-24 00:17:08 -04:00
chhylp123 c972c64b39 add "n-weight" 2021-04-24 00:03:36 -04:00
chhylp123 f8ee584291 code clean 2021-04-16 20:28:48 -04:00
chhylp123 36afbce9bc update unitig distance 2021-04-12 04:54:06 -04:00
chhylp123 46e899bbae backup r321 2021-04-01 21:02:57 -04:00
chhylp123 0605aa1961 r317 2021-03-27 02:46:48 -04:00
chhylp123 d89a630ff3 update contig flipping 2021-03-25 03:03:19 -04:00
chhylp123 9e3e1e8bab update r351 2021-03-20 23:08:55 -04:00
chhylp123 ede6ccef00 fix misassemblies 2021-03-20 18:36:02 -04:00