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Author SHA1 Message Date
chhylp123 320dc58127 fix bug at r_utg 2020-08-04 16:43:50 -04:00
chhylp123 ef5ba0cc2c update help/man v0.10 2020-07-31 21:32:02 -04:00
chhylp123 8bdc21799c update READMEN 2020-07-31 12:42:27 -04:00
chhylp123 7c385e219a update version number 2020-07-31 12:36:37 -04:00
chhylp123 d92f9519ae Merge branch 'master' of https://github.com/chhylp123/Long_read_assembly 2020-07-31 12:34:49 -04:00
chhylp123 6ca9d01f06 update version number 2020-07-31 12:28:30 -04:00
chhylp123 23f0a8b020 Merge pull request #23 from chhylp123/hifiasm_high_het 
Hifiasm high het
 2020-07-31 12:24:43 -04:00
chhylp123 9d659fd2e0 update v0.10 2020-07-31 12:23:25 -04:00
chhylp123 ace34ae2b8 for high-het and coverage 2020-07-28 13:07:35 -04:00
Heng Li 94008c02ac Re-release hifiasm-0.9 (r289) v0.9 2020-07-19 14:44:28 -04:00
Heng Li 1e4d67ee64 r288: reorganized command line help messages 2020-07-19 13:43:30 -04:00
Heng Li ff4ef89fe3 r287: fixed the INT32_MAX compiling error 2020-07-19 11:22:23 -04:00
chhylp123 952471657f change max coverage of pri-range 2020-07-18 17:40:58 -04:00
chhylp123 88ab801717 update HA_VERSION 2020-07-13 22:45:49 -04:00
chhylp123 a309e610ca resolve conflict 2020-07-13 22:44:40 -04:00
chhylp123 fda858f9e7 update coverage 2020-07-13 22:34:26 -04:00
chhylp123 c01b593d7c using coverage 2020-07-12 16:03:01 -04:00
chhylp123 a25c37ed89 update k-mer peaks 2020-07-07 13:20:25 -04:00
chhylp123 2e56ef7db5 apply coverage to purge_dups 2020-07-06 10:02:03 -04:00
Heng Li 309e885365 Release hifiasm-0.8 (r279) v0.8 2020-06-27 19:56:49 -04:00
Heng Li 5cb42cafc2 more README changees 2020-06-27 19:25:38 -04:00
chhylp123 428cc01d10 update link 2020-06-27 15:33:49 -04:00
chhylp123 3481a2fe2b reorganize readme 2020-06-27 15:28:36 -04:00
Heng Li f1e78720aa more getting started; added NA12878 and links 2020-06-27 14:22:39 -04:00
chhylp123 e401f88e57 update test datasets 2020-06-27 13:03:46 -04:00
chhylp123 7a2e02cb77 fix typo 2020-06-27 12:56:02 -04:00
chhylp123 3a88079a6e update typo 2020-06-27 12:44:12 -04:00
chhylp123 be26acc0e0 update readme 2020-06-27 12:43:14 -04:00
chhylp123 03c9028848 update readme 2020-06-27 12:36:33 -04:00
chhylp123 0071251c82 update README 2020-06-27 12:35:47 -04:00
chhylp123 39cf3f5dd8 update README 2020-06-27 12:34:41 -04:00
chhylp123 acba806ce1 update readme 2020-06-27 12:30:57 -04:00
chhylp123 46987e792a update readme 2020-06-27 12:29:23 -04:00
chhylp123 1ec650e3e5 update readme 2020-06-27 12:27:16 -04:00
chhylp123 61657f4b29 update readme 2020-06-27 12:06:59 -04:00
chhylp123 35ee94f040 update README 2020-06-27 11:46:48 -04:00
chhylp123 ed137c2ac6 update readme 2020-06-27 11:38:08 -04:00
chhylp123 9cc97472d9 update readme 2020-06-27 11:25:21 -04:00
chhylp123 449950cddb update readme 2020-06-27 10:57:22 -04:00
chhylp123 71f6c93d58 add options 2020-06-08 17:51:36 -04:00
Heng Li 97f6efc4da r255: faster way to extract reads 2020-06-03 21:38:59 -04:00
Heng Li eddbc61952 r254: added --ex-list and --ex-iter 2020-06-03 20:46:34 -04:00
Heng Li e247c5f042 r253: Merge branch 'master' into dev-lh3 2020-05-23 21:43:22 -04:00
chhylp123 d36e1e7782 fixed bugs for trio-binning v0.7 2020-05-17 11:53:12 -04:00
Heng Li f6ea45b58a r251: always keep the best hits 2020-05-08 00:40:53 -04:00
Heng Li e544360043 r250: fixed a bug in selecting top chains 2020-05-07 14:49:49 -04:00
Heng Li 3364a29b87 r249: make max overlap error rate CLI options 2020-05-06 01:16:50 -04:00
Heng Li 331e437c72 r248: contained reads not handled properly 2020-05-03 00:27:53 -04:00
chhylp123 7f6725ead3 expose purge_dups v0.6 2020-04-18 00:45:47 -04:00
Heng Li 85c57fd087 r246: made purge_dups optional for trio binning 2020-04-15 23:57:18 -04:00