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Author SHA1 Message Date
chhylp123 320dc58127 fix bug at r_utg 2020-08-04 16:43:50 -04:00
chhylp123 ef5ba0cc2c update help/man 2020-07-31 21:32:02 -04:00
chhylp123 8bdc21799c update READMEN 2020-07-31 12:42:27 -04:00
chhylp123 7c385e219a update version number 2020-07-31 12:36:37 -04:00
chhylp123 d92f9519ae Merge branch 'master' of https://github.com/chhylp123/Long_read_assembly 2020-07-31 12:34:49 -04:00
chhylp123 6ca9d01f06 update version number 2020-07-31 12:28:30 -04:00
chhylp123 23f0a8b020 Merge pull request #23 from chhylp123/hifiasm_high_het 
Hifiasm high het
 2020-07-31 12:24:43 -04:00
chhylp123 9d659fd2e0 update v0.10 2020-07-31 12:23:25 -04:00
chhylp123 ace34ae2b8 for high-het and coverage 2020-07-28 13:07:35 -04:00
chhylp123 952471657f change max coverage of pri-range 2020-07-18 17:40:58 -04:00
chhylp123 88ab801717 update HA_VERSION 2020-07-13 22:45:49 -04:00
chhylp123 a309e610ca resolve conflict 2020-07-13 22:44:40 -04:00
chhylp123 fda858f9e7 update coverage 2020-07-13 22:34:26 -04:00
chhylp123 c01b593d7c using coverage 2020-07-12 16:03:01 -04:00
chhylp123 a25c37ed89 update k-mer peaks 2020-07-07 13:20:25 -04:00
chhylp123 2e56ef7db5 apply coverage to purge_dups 2020-07-06 10:02:03 -04:00
chhylp123 428cc01d10 update link 2020-06-27 15:33:49 -04:00
chhylp123 3481a2fe2b reorganize readme 2020-06-27 15:28:36 -04:00
chhylp123 e401f88e57 update test datasets 2020-06-27 13:03:46 -04:00
chhylp123 7a2e02cb77 fix typo 2020-06-27 12:56:02 -04:00
chhylp123 3a88079a6e update typo 2020-06-27 12:44:12 -04:00
chhylp123 be26acc0e0 update readme 2020-06-27 12:43:14 -04:00
chhylp123 03c9028848 update readme 2020-06-27 12:36:33 -04:00
chhylp123 0071251c82 update README 2020-06-27 12:35:47 -04:00
chhylp123 39cf3f5dd8 update README 2020-06-27 12:34:41 -04:00
chhylp123 acba806ce1 update readme 2020-06-27 12:30:57 -04:00
chhylp123 46987e792a update readme 2020-06-27 12:29:23 -04:00
chhylp123 1ec650e3e5 update readme 2020-06-27 12:27:16 -04:00
chhylp123 61657f4b29 update readme 2020-06-27 12:06:59 -04:00
chhylp123 35ee94f040 update README 2020-06-27 11:46:48 -04:00
chhylp123 ed137c2ac6 update readme 2020-06-27 11:38:08 -04:00
chhylp123 9cc97472d9 update readme 2020-06-27 11:25:21 -04:00
chhylp123 449950cddb update readme 2020-06-27 10:57:22 -04:00
chhylp123 71f6c93d58 add options 2020-06-08 17:51:36 -04:00
chhylp123 d36e1e7782 fixed bugs for trio-binning 2020-05-17 11:53:12 -04:00
chhylp123 7f6725ead3 expose purge_dups 2020-04-18 00:45:47 -04:00
chhylp123 57e979ca17 update for v0.5.0 2020-04-14 00:10:58 -04:00
chhylp123 4216384df6 update README 2020-04-12 20:59:49 -04:00
chhylp123 3120db1340 update README 2020-04-12 20:53:18 -04:00
chhylp123 69e8282b9a update README 2020-04-12 20:51:18 -04:00
chhylp123 b93baa3cbd update README 2020-04-12 20:46:54 -04:00
chhylp123 57b16e9e1f fix warning 2020-04-12 17:46:30 -04:00
chhylp123 b245e9a760 fix warning 2020-04-12 17:46:20 -04:00
chhylp123 20c6c1d2e6 update trio-binning 2020-04-10 23:32:15 -04:00
chhylp123 943b6947cb update purge_dup by LIS 2020-04-10 13:58:36 -04:00
chhylp123 a288415111 bug fixing for purge_dup 2020-04-08 16:55:04 -04:00
chhylp123 9cc563c7c6 do hap alignment in parallel 2020-04-07 11:18:28 -04:00
chhylp123 87fc103e63 fix small bug 2020-04-06 02:03:34 -04:00
chhylp123 c57b63653d Merge pull request #8 from chhylp123/flt-p 
for purge_dup
 2020-04-05 11:44:56 -04:00
chhylp123 ac3fcc339a for purge_dup 2020-04-05 11:10:56 -04:00
chhylp123 3c1d3cf6a1 disable debug 2020-03-23 00:25:20 -04:00
chhylp123 ee2573a05c Merge branch 'master' of https://github.com/chhylp123/Long_read_assembly 2020-03-22 18:32:47 -04:00
chhylp123 d3cb016aba Update README 2020-03-22 18:31:59 -04:00
chhylp123 670bd10093 update man 2020-03-22 18:01:04 -04:00
chhylp123 90e290636a code clean 2020-03-22 17:06:36 -04:00
chhylp123 c72d419711 for hifiasm 3.0 2020-03-22 16:54:32 -04:00
chhylp123 4536141b9a update README for Redwood 
update README for Redwood
 2020-03-04 14:58:04 -05:00
chhylp123 6ae51c84f6 Merge branch 'master' of https://github.com/chhylp123/Long_read_assembly 2020-02-07 15:00:14 -05:00
chhylp123 6246132702 update for 0.2.0 2020-02-07 14:52:14 -05:00
chhylp123 6edf54048c update N50 2020-01-14 11:09:38 -05:00
chhylp123 c63ce670f7 improved N50 2020-01-14 10:59:51 -05:00
chhylp123 387c64c5fc test contribution 2020-01-07 03:49:15 +08:00
Haoyu Cheng 67f1173eb6 update readme 2020-01-07 03:40:53 +08:00
Haoyu Cheng 562a990934 remove tmp files 2020-01-04 12:27:52 +08:00
Haoyu Cheng e7fa1554aa update readme 2020-01-04 12:16:35 +08:00
Haoyu Cheng 39fb70b49c update readme 2020-01-04 12:15:33 +08:00
Haoyu Cheng 03c06781a0 update README 2020-01-04 12:13:35 +08:00
Haoyu Cheng 180785a7ce update readme 2020-01-04 12:11:21 +08:00
Haoyu Cheng 34ac643038 update README 2020-01-04 12:10:08 +08:00
Haoyu Cheng e17bed62c0 update readme 2020-01-04 12:07:24 +08:00
Haoyu Cheng 7ecd489edc update man-page 2020-01-04 12:01:35 +08:00
Haoyu Cheng d8416873f3 upadate man-page and readme 2020-01-04 11:54:08 +08:00
Haoyu Cheng 1e46798bfb update readme and help information 2020-01-02 08:58:50 +08:00
chhylp123 36b42c2d83 Merge pull request #3 from lh3/lh3-fix 
Changed output file names
 2019-12-31 07:06:11 -05:00
Haoyu Cheng cb487a761c fix bugs 2019-12-29 10:10:10 -05:00
Haoyu Cheng 4dd637127f fix bugs 2019-12-29 02:38:10 -05:00
Haoyu Cheng 8325685359 README 2019-12-28 16:57:36 -05:00
Haoyu Cheng 443a9449b7 update result 2019-12-28 16:56:05 -05:00
Haoyu Cheng 4095fc2839 update result 2019-12-28 16:55:21 -05:00
Haoyu Cheng 4998cd87c7 update results 2019-12-28 16:46:34 -05:00
Haoyu Cheng a60a2d7ddd update help 2019-12-28 16:38:21 -05:00
Haoyu Cheng b65774fef5 README 2019-12-28 16:20:39 -05:00
Haoyu Cheng 8f21e7943f fix words 2019-12-28 16:19:50 -05:00
Haoyu Cheng ea248038c6 Update for overlaps 2019-12-28 16:18:50 -05:00
Haoyu Cheng 93ea81b2d2 README 2019-12-28 05:09:53 -05:00
Haoyu Cheng ba926db6ad README 2019-12-28 05:08:45 -05:00
Haoyu Cheng 54c80d8400 README 2019-12-28 05:07:35 -05:00
Haoyu Cheng 64d5ae10d4 README 2019-12-28 05:03:12 -05:00
Haoyu Cheng 14899c5f09 README 2019-12-28 05:00:44 -05:00
Haoyu Cheng f9e805854e README 2019-12-28 04:55:07 -05:00
Haoyu Cheng 1523d10291 README 2019-12-28 04:45:53 -05:00
Haoyu Cheng 8f549c1c16 README 2019-12-26 17:08:37 -05:00
Haoyu Cheng 94fb1342a6 README 2019-12-26 17:03:42 -05:00
Haoyu Cheng 24af570698 README 2019-12-26 16:58:29 -05:00
Haoyu Cheng 0b0dd2f741 README 2019-12-26 16:51:27 -05:00
Haoyu Cheng f1428835f1 README 2019-12-26 16:46:08 -05:00
Haoyu Cheng 991c4c3d22 README 2019-12-26 16:44:28 -05:00
Haoyu Cheng d72f9b9c3a readme 2019-12-26 16:32:26 -05:00
Haoyu Cheng 220dbd2a51 README 2019-12-26 16:13:07 -05:00
Haoyu Cheng c7553d7c8d README 2019-12-26 16:12:24 -05:00