Commit Graph

451 Commits

Author SHA1 Message Date
Charlotte Weaver
c2b3f331cf Add layout and diffexp calculations to cli options 2018-08-07 16:37:47 -07:00
Charlotte Weaver
499b9551f1 moved scanpy parser to scanpy class 2018-08-07 16:37:02 -07:00
Charlotte Weaver
0969854e9e Merge pull request #162 from chanzuckerberg/csweaver/require
Trimming out secondary dependencies from requirements
2018-08-07 16:14:28 -07:00
Charlotte Weaver
247b89ab0c Update README.md 2018-08-07 15:54:25 -07:00
Bruce Martin
77f6e918b4 Merge pull request #163 from chanzuckerberg/csweaver/api-base
api host 0.0.0.0 -> 127.0.0.1
2018-08-07 15:46:13 -07:00
Charlotte Weaver
ccee3e0a38 api host 0.0.0.0 -> 127.0.0.1 2018-08-07 15:43:13 -07:00
Charlotte Weaver
c11ae77de4 Trimming out secondary dependencies from requirements 2018-08-07 12:53:48 -07:00
Colin Megill
c47f8d6ca5 Merge pull request #161 from chanzuckerberg/#152-security-warnings
remove warnings in npm install, resolve security warnings
2018-08-07 15:35:27 -04:00
Colin Megill
10cc801197 remove warnings in npm install, resolve security warnings 2018-08-07 15:00:28 -04:00
Charlotte Weaver
0db24a6c07 Merge pull request #157 from chanzuckerberg/csweaver/readme-data
Added instructions on how to load your own data in scanpy
2018-08-07 10:19:31 -07:00
Charlotte Weaver
9236f02637 Merge branch 'master' into csweaver/readme-data 2018-08-07 10:18:57 -07:00
Sidney Bell
12c52a55f7 Very minor changes to elaborate in a few places 2018-08-07 07:42:45 -07:00
Charlotte Weaver
16d7fac88e Added instructions on how to load your own data in scanpy 2018-08-06 17:15:35 -07:00
Charlotte Weaver
12b8232327 Merge pull request #155 from chanzuckerberg/csweaver/pip-install
Use pip instead of python setup.py
2018-08-06 16:03:39 -07:00
Charlotte Weaver
a22a4e2473 Use pip instead of python setup.py 2018-08-06 14:56:42 -07:00
Charlotte Weaver
8401d1dd3d Merge pull request #154 from chanzuckerberg/build-fix
Fix build
2018-08-06 12:23:41 -07:00
Colin Megill
3822d4b005 upgrade react, webpack inline source, html plugin 2018-08-06 15:16:17 -04:00
Colin Megill
6bc94a53ce Merge pull request #148 from chanzuckerberg/bkmartinjr/getfix2
fix for _.get typo
2018-08-06 12:29:41 -04:00
Colin Megill
15923d4523 Merge pull request #151 from chanzuckerberg/bkmartinjr/package-cleanup
remove duplicates dependencies
2018-08-06 12:26:55 -04:00
bkmartinjr
c69a730e12 remove duplicates dependencies 2018-08-06 08:40:15 -07:00
bkmartinjr
ff07bb1ebb fix for _.get typo 2018-08-04 15:14:40 -07:00
Charlotte Weaver
0c8b86d1c4 Merge pull request #141 from chanzuckerberg/csweaver/datatoapp
Move data to a property of the app object
2018-08-03 13:03:34 -07:00
Colin Megill
dfea46eff0 Merge pull request #144 from chanzuckerberg/#41-get-fixes
_.get instead of ternary
2018-08-03 15:22:08 -04:00
Colin Megill
76d5252506 Merge pull request #143 from chanzuckerberg/#53-react-upgrade
React 16
2018-08-03 15:20:08 -04:00
Colin Megill
cb6b784dfd final component conversions 2018-08-03 15:18:40 -04:00
Charlotte Weaver
e682028b8e Use flask's current_app 2018-08-03 10:54:43 -07:00
Sidney Bell
77ca5c267e Update readme (#137)
* Update readme

* Add demo gif

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md
2018-08-03 10:23:57 -07:00
Charlotte Weaver
8dbb131afd Move data to a property of the app object 2018-08-02 16:18:17 -07:00
Charlotte Weaver
64bfb7416e Merge pull request #121 from chanzuckerberg/csweaver/cli
Csweaver/cli
2018-08-02 15:12:11 -07:00
Colin Megill
7ae1db627c continuous legend conversion 2018-08-02 15:32:26 -04:00
Charlotte Weaver
ee5fe8f37b Merge pull request #138 from chanzuckerberg/csweaver/cache
Add simple cache to backend
2018-08-02 11:55:21 -07:00
Charlotte Weaver
e11b905836 Cleaning up import statements 2018-08-02 11:34:00 -07:00
Charlotte Weaver
116cef551c Switch to default timeout for cache 2018-08-02 11:28:44 -07:00
Charlotte Weaver
489a2dd5db Add flask-caching to requirements 2018-08-01 16:29:38 -07:00
Charlotte Weaver
0a36fac142 10 day cache (down from 1000)
I can expect a scientist to leave this running over the weekend on their laptop and still expect fast results. If someone leaves it running for a few years the data can probably be safely recalculated.
2018-08-01 15:48:56 -07:00
Charlotte Weaver
69fca7ea8b Using flask_caching instead
More recent module, same API
2018-08-01 15:46:04 -07:00
Charlotte Weaver
7642251d44 Add simple cache to backend 2018-08-01 13:32:04 -07:00
Colin Megill
20331313e0 move to componentDidUpdate 2018-07-31 16:50:48 -04:00
Colin Megill
ee2b7fc13f stub getDerivedStateFromProps 2018-07-31 11:07:53 -04:00
Colin Megill
78077ad566 pulse loader doesn't work with 16 2018-07-30 14:29:54 -04:00
Colin Megill
0b84e9e804 react 16 2018-07-30 14:29:44 -04:00
Colin Megill
b574542a60 _.get fixes 2018-07-23 17:06:32 -04:00
Charlotte Weaver
516ecc2ad3 Merge pull request #123 from chanzuckerberg/csweaver/rm-duplicate-tests
Removed duplicate jest tests
2018-07-20 13:58:00 -07:00
Charlotte Weaver
d77accc858 Update travis for CLI 2018-07-20 13:15:17 -07:00
Charlotte Weaver
83e7685f57 Update readme for CLI 2018-07-20 11:47:42 -07:00
Charlotte Weaver
de5e0f4ea7 Address PR review issues 2018-07-20 11:43:31 -07:00
Charlotte Weaver
4b2f24cb40 Removed duplicate jest tests 2018-07-20 11:06:59 -07:00
Charlotte Weaver
fec055ede3 Merge pull request #122 from chanzuckerberg/csweaver/branding-template
Updated obvious areas to cellxgene branding
2018-07-20 09:21:29 -07:00
Charlotte Weaver
fdd9b1d0bd Updated obvious areas to cellxgene branding 2018-07-19 17:37:40 -07:00
Charlotte Weaver
9c72f2c2d5 Updating travis file to match new cli 2018-07-19 17:23:30 -07:00