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Author SHA1 Message Date
Charlotte Weaver 8dbb131afd Move data to a property of the app object 2018-08-02 16:18:17 -07:00
Charlotte Weaver 64bfb7416e Merge pull request #121 from chanzuckerberg/csweaver/cli 
Csweaver/cli
 2018-08-02 15:12:11 -07:00
Charlotte Weaver ee5fe8f37b Merge pull request #138 from chanzuckerberg/csweaver/cache 
Add simple cache to backend
 2018-08-02 11:55:21 -07:00
Charlotte Weaver e11b905836 Cleaning up import statements 2018-08-02 11:34:00 -07:00
Charlotte Weaver 116cef551c Switch to default timeout for cache 2018-08-02 11:28:44 -07:00
Charlotte Weaver 489a2dd5db Add flask-caching to requirements 2018-08-01 16:29:38 -07:00
Charlotte Weaver 0a36fac142 10 day cache (down from 1000) 
I can expect a scientist to leave this running over the weekend on their laptop and still expect fast results. If someone leaves it running for a few years the data can probably be safely recalculated.
 2018-08-01 15:48:56 -07:00
Charlotte Weaver 69fca7ea8b Using flask_caching instead 
More recent module, same API
 2018-08-01 15:46:04 -07:00
Charlotte Weaver 7642251d44 Add simple cache to backend 2018-08-01 13:32:04 -07:00
Charlotte Weaver 516ecc2ad3 Merge pull request #123 from chanzuckerberg/csweaver/rm-duplicate-tests 
Removed duplicate jest tests
 2018-07-20 13:58:00 -07:00
Charlotte Weaver d77accc858 Update travis for CLI 2018-07-20 13:15:17 -07:00
Charlotte Weaver 83e7685f57 Update readme for CLI 2018-07-20 11:47:42 -07:00
Charlotte Weaver de5e0f4ea7 Address PR review issues 2018-07-20 11:43:31 -07:00
Charlotte Weaver 4b2f24cb40 Removed duplicate jest tests 2018-07-20 11:06:59 -07:00
Charlotte Weaver fec055ede3 Merge pull request #122 from chanzuckerberg/csweaver/branding-template 
Updated obvious areas to cellxgene branding
 2018-07-20 09:21:29 -07:00
Charlotte Weaver fdd9b1d0bd Updated obvious areas to cellxgene branding 2018-07-19 17:37:40 -07:00
Charlotte Weaver 9c72f2c2d5 Updating travis file to match new cli 2018-07-19 17:23:30 -07:00
Charlotte Weaver 2c7a11ab80 Added cli command for run 2018-07-19 17:21:28 -07:00
Charlotte Weaver 45f61d87d7 Initial CLI 
added basic cli for running
 2018-07-18 21:45:07 -07:00
Charlotte Weaver 71d1cd250c Merge pull request #119 from chanzuckerberg/csweaver/travis 
Setup travis integration
 2018-07-18 14:14:13 -07:00
Charlotte Weaver 558e8f522a Style for travis build files 2018-07-18 14:07:04 -07:00
Charlotte Weaver 895cfcebe0 Added initial travis config file 2018-07-18 10:21:24 -07:00
Charlotte Weaver cd7c06c822 Merge pull request #120 from chanzuckerberg/csweaver/packaging-improvements 
Csweaver/packaging improvements
 2018-07-17 16:25:31 -07:00
Charlotte Weaver 8b0d7d5cf6 Clarify install docs for python3 and venvs 2018-07-17 16:03:33 -07:00
Charlotte Weaver 28d341cf1c Fix default path for dataset 2018-07-17 16:03:06 -07:00
Charlotte Weaver 59022d7a9c Merge pull request #117 from chanzuckerberg/csweaver/tests 
Csweaver/tests
 2018-07-17 13:29:48 -07:00
Charlotte Weaver fdaaaf69a2 use unittest assert methods instead of assert 2018-07-17 11:01:38 -07:00
Charlotte Weaver 6961b64d87 Updated readme for python packaged version 2018-07-16 14:20:50 -07:00
Charlotte Weaver a5423a6911 Adding minor tests to scanpy calculation code 2018-07-16 11:48:53 -07:00
Charlotte Weaver 05b9a6833d Add tests for scanpy engine 2018-07-16 11:48:53 -07:00
Charlotte Weaver b8f501a46c Move to running tests after installing 
to avoid the sys.path.insert
 2018-07-16 11:48:53 -07:00
Charlotte Weaver b6f253e843 Initial packaging working 
pip install works if client files are built and moved manually
 2018-07-16 11:48:53 -07:00
Charlotte Weaver 851ddde130 Merge pull request #116 from chanzuckerberg/csweaver/packaging 
Csweaver/packaging
 2018-07-16 11:44:56 -07:00
Charlotte Weaver 2e1da27a31 Merge branch 'webgl-pause' 2018-07-16 11:11:23 -07:00
Charlotte Weaver d375c48b6a Merge branch 'master' into webgl-pause 2018-07-16 11:10:51 -07:00
Charlotte Weaver 82c4d2948c Merge branch 'csweaver/addbackend' 2018-07-16 10:58:46 -07:00
Charlotte Weaver 5a15f5a915 mergining addbackend 2018-07-16 10:58:33 -07:00
Charlotte Weaver 8aafd7d271 fix eslint-scope vulnerability 2018-07-12 13:05:27 -07:00
Charlotte Weaver 02799cea8e No relative imports "up" 2018-07-12 12:59:34 -07:00
Charlotte Weaver ba9e5f1e41 flake8/lint cleanup 2018-07-12 11:52:24 -07:00
Colin Megill 03ec942723 Merge pull request #115 from chanzuckerberg/eslint-scope 
eslint scope pin
 2018-07-12 14:37:29 -04:00
Colin Megill dd019d83e5 eslint scope pin 2018-07-12 14:36:57 -04:00
Colin Megill 2721e91788 zoom working 2018-07-11 11:28:23 -04:00
Charlotte Weaver f466ef6553 Added entry point to run cellxgene from console 2018-07-10 12:56:42 -07:00
Charlotte Weaver a3bf802aec Add example dataset 2018-07-06 16:03:24 -07:00
Charlotte Weaver 071c24d0f4 Add client build script 2018-07-06 15:59:20 -07:00
Charlotte Weaver d937485034 Merge branch 'csweaver/packaging' of github.com:chanzuckerberg/cellxgene into csweaver/packaging 2018-07-06 15:51:08 -07:00
Charlotte Weaver 0639759a90 Initial packaging working 
pip install works if client files are built and moved manually
 2018-07-06 15:44:22 -07:00
Charlotte Weaver 558950852e Merge remote-tracking branch 'origin/csweaver/addbackend' into csweaver/addbackend 2018-07-06 15:43:37 -07:00
Charlotte Weaver cd1b67fd09 Rename diffexpression 2018-07-06 15:41:08 -07:00