Commit Graph

966 Commits

Author SHA1 Message Date
Sidney Bell
bb3032ea2f Update getting started docs w/ direct url launch 2019-11-26 12:57:50 -08:00
Sidney Bell
5e471349e7 Cleanup docs files 2019-11-26 08:44:23 -08:00
Sidney Bell
0aee4b89e0 Fix docs font 2019-11-26 08:43:57 -08:00
Bruce Martin
d2171b9a2f fix perf regression introduced by user anno changes (#1060) 2019-11-25 18:16:49 -08:00
Bruce Martin
a593e95ab3 annotations CLI and file UX rework (#1049)
* rename config param label-file

* annotations rework - CLI params, file naming and backups

* lint

* improve cli option error checks

* enable session cookies

* enable session cookies

* add session id

* name annotations file in multi-dataset and multi-user safe manner

* pass data user hash to front-end

* add annotation collection name support to front-end

* add constant for annotation data collection name

* parameterize annotation collection name; make it sticky in the session

* clarify comments

* hard wire a temporary data collection name for testing

* prettier

* test comment

* package command

* set annotations  filename dialog

* name  and hash are visible

* wire up data collection capture
2019-11-25 15:28:28 -08:00
Sidney Bell
575f71aaee Fix base url 2019-11-22 18:17:43 -08:00
Sidney Bell
04aa6f8fe9 Merge branch 'sidneymbell/docs-overhaul' 2019-11-22 15:00:24 -08:00
Sidney Bell
298ded6e2d Add site files 2019-11-22 14:59:40 -08:00
Sidney Bell
9bcafeb7c1 [WIP] Overhaul the documentation site (#1030)
Overhaul the whole documentation site
2019-11-22 14:54:20 -08:00
Sidney Bell
85c1b6957e Final annotations notes 2019-11-22 14:53:35 -08:00
Sidney Bell
2f99b317a2 Update annotations docs 2019-11-22 13:57:50 -08:00
Sidney Bell
8535664e9c Typo 2019-11-22 11:26:55 -08:00
Sidney Bell
5ed9f5126b Switch demo datasets to launch directly from URL 2019-11-22 11:26:51 -08:00
Bruce Martin
5713aa8792 category and label name validation updates (#1056)
* update label validation with new schema

* add new error messages for new label errors; general cleanup
2019-11-22 10:32:00 -08:00
Severiano Badajoz
9aaaad6709 tweak allotted width for value name + occupancy and tweak truncating (#1051) 2019-11-21 20:14:11 -08:00
Sidney Bell
621b88bff4 Simplify demo data download 2019-11-21 18:51:30 -08:00
Sidney Bell
ecedf666c7 Bold current page in nav 2019-11-21 18:51:13 -08:00
Sidney Bell
afff2ceec7 Update logo 2019-11-21 18:50:55 -08:00
Sidney Bell
be9a415a4a Typo 2019-11-21 17:02:59 -08:00
Sidney Bell
0295041972 Fix typos, etc in prepare 2019-11-21 17:02:50 -08:00
Sidney Bell
8fe7ee75e8 Minor text edits to launch 2019-11-21 17:02:30 -08:00
Sidney Bell
a3d96aae0a Minor text edits to hosted (i.e., typos) 2019-11-21 17:02:01 -08:00
Sidney Bell
d5d56d89d1 Change text color 2019-11-21 17:01:33 -08:00
Sidney Bell
a6a2841961 Update gifs in gallery (thank you @liaprins-czi !) 2019-11-21 17:01:24 -08:00
Sidney Bell
7bf76fa557 Merge remote-tracking branch 'origin/master' into sidneymbell/docs-overhaul 2019-11-21 16:49:18 -08:00
Colin Megill
c2ededfc62 Anno editing label/category error states (#1048)
* anno error states

* label validation should not treat empty string as error

* disable Submit if no label or category entered

* edit category name error states

* flex start

* pr cleanup

* label name validation fixes

* PR comment responses
2019-11-21 19:08:29 -05:00
Bruce Martin
ee62dd355f [WIP] JS lint and dead code removal (#1053)
* lint and dead code removal

* fix regressions
2019-11-21 14:10:02 -08:00
bkmartinjr
0415c30f0b add security notice to readme 2019-11-20 10:42:27 -08:00
bkmartinjr
79e534e397 additional caveats/warnings for hosting 2019-11-20 10:40:00 -08:00
bkmartinjr
f4919340e9 merge 2019-11-20 10:33:17 -08:00
bkmartinjr
976f9d9ff8 add hosting notes 2019-11-20 10:28:40 -08:00
Bruce Martin
9a540a4f0a fix erroneous state clearing (#1052) 2019-11-19 11:11:19 -08:00
Severiano Badajoz
5968da18b4 fix inconsistent sidebar value height(#1039) 2019-11-18 12:43:16 -08:00
Severiano Badajoz
bd5f816d58 fix dataset title clipping (#1040) 2019-11-18 12:42:55 -08:00
Severiano Badajoz
cf8f1a710d add padding to scatterplot shift (#1043) 2019-11-18 12:41:58 -08:00
Bruce Martin
2d0b646956 js dependency update (#1045) 2019-11-18 11:22:13 -08:00
Bruce Martin
b284e6f820 Improve CLI help (#1025)
* launch option changes

* more CLI help improvements

* change plot help

* additional changes requested

* change metavars for options and subcommand
2019-11-14 13:02:40 -08:00
Bruce Martin
5ea9ac8a9e Add provenance header to labels CSV file (#1041)
* add last mod time lookup to data locator

* store data locator in Driver

* save metadata header in labels csv

* lint

* fix tests

* change datetime format to second precision
2019-11-14 12:33:48 -08:00
Colin Megill
89d748b007 state (#1032) 2019-11-13 15:13:15 -05:00
Severiano Badajoz
68ad4b1228 bump @blueprintjs dependencies (#1038) 2019-11-13 11:56:48 -08:00
Bruce Martin
a52e86a69b improve category and label name validation (#1034) 2019-11-13 09:40:37 -08:00
Severiano Badajoz
a5d343aaa4 add list of wild hosted cellxgene instances 2019-11-12 15:39:04 -08:00
Bruce Martin
04c83993d2 clear color-by mode when current category is deleted (#1033) 2019-11-12 15:31:06 -08:00
bkmartinjr
54d144bb75 add build dependencies for igraph and louvain 2019-11-12 07:56:03 -08:00
bkmartinjr
bf3bf58d6e improve launch docs 2019-11-09 13:03:47 -08:00
bkmartinjr
611c8b98b1 add --backed info to troubleshooting 2019-11-09 12:59:33 -08:00
bkmartinjr
d08506ae12 improve install docs 2019-11-09 12:49:22 -08:00
Bruce Martin
238b7420f7 update deprecated Pandas API (#1021)
* update use of deprecated API

* update pandas depencency
2019-11-08 09:49:52 -08:00
Colin Megill
cadf710bf8 remove duplicate handler (#1027) 2019-11-08 11:18:29 -05:00
Sidney Bell
9c8c28e1cb Overhaul the whole documentation site 2019-11-07 17:03:33 -08:00