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Code Issues Packages Projects Releases Wiki Activity
588 Commits 11 Branches 54 Tags
64091a76a5abac6ab6522e2e5e1c5265a0dd7fea
Commit Graph
126 Commits
Author SHA1 Message Date
chhylp123 adeb2c603d trio-dual/bug for hic phasing 2023-05-31 14:54:50 -04:00
chhylp123 86b7dd424a avoid misassemblies; better polyploidy graph 2023-03-22 12:23:53 -04:00
chhylp123 d4773a497f disable postjoin for the ul assembly 2023-03-13 15:43:22 -04:00
chhylp123 f67faa9c34 path-max and path-min to avoid misassemblies 2023-03-13 11:13:57 -04:00
chhylp123 b533067835 enable dbg-ovec 2023-03-10 23:30:24 -05:00
chhylp123 af4be8ca1a disable integer correction; disable contain dedup 2023-03-10 09:12:07 -05:00
chhylp123 286b897881 r513 2023-02-16 00:04:06 -05:00
chhylp123 f2da12a2ad 508 —> futhur graph cleaning 2023-02-12 22:49:12 -05:00
chhylp123 1166b92eb4 r502->additional alignment 2023-01-25 09:39:41 -05:00
chhylp123 25d6857d44 r499->false duplications 2023-01-17 04:49:56 -05:00
chhylp123 2bf5119bb5 update help information 2023-01-12 01:22:34 -05:00
chhylp123 0613b18af9 r493 ->HiC/UL/Trans 2023-01-11 20:38:45 -05:00
chhylp123 a674110b23 fixed het/hom node bugs 2022-12-08 03:07:14 -05:00
chhylp123 a3b72457f0 cleaner assembly graph 2022-12-06 09:52:00 -05:00
chhylp123 9831afaf26 code clean 2022-11-17 09:31:56 -05:00
chhylp123 5da05f308f extend ed alignment 2022-09-13 17:29:27 -04:00
chhylp123 3064e1373b better uovlp saving 2022-04-22 23:10:21 -04:00
chhylp123 9c79bdfe7f UL_gdp 2022-04-13 16:15:03 -04:00
chhylp123 0ce5a7ba5b integration/print het sites 2022-01-17 18:29:48 -05:00
chhylp123 b640289b19 better read phasing 2021-12-07 22:47:52 -05:00
chhylp123 763634e1a9 kpt_dup 2021-11-28 19:35:32 -05:00
chhylp123 7dd4a848b9 debug graph 2021-09-26 13:51:13 -04:00
chhylp123 809ca18dda r373 2021-09-10 17:17:44 -04:00
chhylp123 17b5cb21d3 tmp macro 2021-08-30 09:30:48 -04:00
chhylp123 e230b3a55f 0.16.0 release 2021-08-22 21:58:00 -04:00
chhylp123 37b07e4d33 better seeding 2021-08-22 09:53:34 -04:00
chhylp123 bfff640a82 dp opt 2021-08-12 11:16:10 -04:00
chhylp123 3c8a933b8a Merge remote-tracking branch 'origin/dev-lh3' 2021-07-27 19:50:29 -04:00
chhylp123 321acb2d8a update for r350 2021-07-26 00:16:00 -04:00
chhylp123 b14f894160 seperate purgeing and hom peak 2021-07-25 11:23:06 -04:00
chhylp123 62b7418257 update 0.15.5 2021-07-22 00:59:52 -04:00
chhylp123 5a400af39d r342-misjoin 2021-06-19 14:09:09 -04:00
chhylp123 24e5453781 bug fix 2021-05-02 14:16:36 -04:00
chhylp123 11430d6a3b r329 2021-04-25 14:50:36 -04:00
chhylp123 c972c64b39 add "n-weight" 2021-04-24 00:03:36 -04:00
chhylp123 efacf8e796 bug fixing 2021-04-16 22:26:28 -04:00
chhylp123 f8ee584291 code clean 2021-04-16 20:28:48 -04:00
chhylp123 ebfc04d253 clean purge_dups 2021-04-03 16:26:58 -04:00
chhylp123 46e899bbae backup r321 2021-04-01 21:02:57 -04:00
Heng Li 863b20773a Merge branch 'master' into dev-lh3 2021-03-18 16:11:43 -04:00
chhylp123 98a04c168a update r313 2021-03-18 05:26:33 -04:00
chhylp123 4c2ce6fc6b update trans chain 2021-03-10 22:46:50 -05:00
chhylp123 8aa87fdce8 purge_dups for high het 2021-03-08 20:52:11 -05:00
Heng Li 8e98fb2276 Merge branch 'master' into dev-lh3 2021-03-02 19:27:44 -05:00
chhylp123 e8b92f7a40 backup for hic 2021-02-18 00:58:25 -05:00
chhylp123 18086e2c2e update 0.14-r310 2021-02-13 23:21:45 -05:00
chhylp123 8467d58ef1 for v0.14 2021-02-09 13:00:23 -05:00
Heng Li 3b8f73fbab r332: increased mz sample dist from 200 to 500 2021-01-22 10:31:29 -05:00
Heng Li da672118e5 r330: unimap heuristic for mz sampling 2021-01-21 11:05:37 -05:00
chhylp123 a009026e65 fix bug for broken bubbles 2021-01-15 07:33:13 -05:00