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Code Issues Packages Projects Releases Wiki Activity
640 Commits 11 Branches 54 Tags
2c77b3c87efb492da4ac51a88c5467d97f2fb3b8
Commit Graph
138 Commits
Author SHA1 Message Date
chhylp123 dbdef7ff63 fix Print_H 2024-12-06 05:29:19 -05:00
chhylp123 676385cf8e ont simplex support 2024-11-27 13:27:13 -05:00
chhylp123 80fa5ed436 ONT EC 2024-11-12 23:53:29 -05:00
chhylp123 6de4e14782 update before fly HPC 2024-10-29 14:59:52 -04:00
chhylp123 ade800990e update for reference read hpc 2024-10-27 13:22:06 -04:00
chhylp123 e8b18560a5 0.20.0-r631 2024-10-09 17:09:10 -04:00
chhylp123 70fd9a0b1f keeping more telomeres 2024-05-06 04:02:20 -04:00
chhylp123 61ceb3a4e1 fix bubble issue 2023-11-06 00:09:38 -05:00
chhylp123 4ca8951f9d fix bug for gen_contain_consensus_chain 2023-10-22 13:23:27 -04:00
chhylp123 281ae6ba89 add scaffolding 2023-10-10 12:40:29 -04:00
chhylp123 c7685e6f19 checkpoint for scaffolding 2023-09-15 12:58:34 -04:00
chhylp123 858b95a3bb disable multiple assertions 2023-08-17 19:58:35 -04:00
chhylp123 adeb2c603d trio-dual/bug for hic phasing 2023-05-31 14:54:50 -04:00
chhylp123 86b7dd424a avoid misassemblies; better polyploidy graph 2023-03-22 12:23:53 -04:00
chhylp123 d4773a497f disable postjoin for the ul assembly 2023-03-13 15:43:22 -04:00
chhylp123 f67faa9c34 path-max and path-min to avoid misassemblies 2023-03-13 11:13:57 -04:00
chhylp123 b533067835 enable dbg-ovec 2023-03-10 23:30:24 -05:00
chhylp123 af4be8ca1a disable integer correction; disable contain dedup 2023-03-10 09:12:07 -05:00
chhylp123 286b897881 r513 2023-02-16 00:04:06 -05:00
chhylp123 f2da12a2ad 508 —> futhur graph cleaning 2023-02-12 22:49:12 -05:00
chhylp123 1166b92eb4 r502->additional alignment 2023-01-25 09:39:41 -05:00
chhylp123 25d6857d44 r499->false duplications 2023-01-17 04:49:56 -05:00
chhylp123 2bf5119bb5 update help information 2023-01-12 01:22:34 -05:00
chhylp123 0613b18af9 r493 ->HiC/UL/Trans 2023-01-11 20:38:45 -05:00
chhylp123 a674110b23 fixed het/hom node bugs 2022-12-08 03:07:14 -05:00
chhylp123 a3b72457f0 cleaner assembly graph 2022-12-06 09:52:00 -05:00
chhylp123 9831afaf26 code clean 2022-11-17 09:31:56 -05:00
chhylp123 5da05f308f extend ed alignment 2022-09-13 17:29:27 -04:00
chhylp123 3064e1373b better uovlp saving 2022-04-22 23:10:21 -04:00
chhylp123 9c79bdfe7f UL_gdp 2022-04-13 16:15:03 -04:00
chhylp123 0ce5a7ba5b integration/print het sites 2022-01-17 18:29:48 -05:00
chhylp123 b640289b19 better read phasing 2021-12-07 22:47:52 -05:00
chhylp123 763634e1a9 kpt_dup 2021-11-28 19:35:32 -05:00
chhylp123 7dd4a848b9 debug graph 2021-09-26 13:51:13 -04:00
chhylp123 809ca18dda r373 2021-09-10 17:17:44 -04:00
chhylp123 17b5cb21d3 tmp macro 2021-08-30 09:30:48 -04:00
chhylp123 e230b3a55f 0.16.0 release 2021-08-22 21:58:00 -04:00
chhylp123 37b07e4d33 better seeding 2021-08-22 09:53:34 -04:00
chhylp123 bfff640a82 dp opt 2021-08-12 11:16:10 -04:00
chhylp123 3c8a933b8a Merge remote-tracking branch 'origin/dev-lh3' 2021-07-27 19:50:29 -04:00
chhylp123 321acb2d8a update for r350 2021-07-26 00:16:00 -04:00
chhylp123 b14f894160 seperate purgeing and hom peak 2021-07-25 11:23:06 -04:00
chhylp123 62b7418257 update 0.15.5 2021-07-22 00:59:52 -04:00
chhylp123 5a400af39d r342-misjoin 2021-06-19 14:09:09 -04:00
chhylp123 24e5453781 bug fix 2021-05-02 14:16:36 -04:00
chhylp123 11430d6a3b r329 2021-04-25 14:50:36 -04:00
chhylp123 c972c64b39 add "n-weight" 2021-04-24 00:03:36 -04:00
chhylp123 efacf8e796 bug fixing 2021-04-16 22:26:28 -04:00
chhylp123 f8ee584291 code clean 2021-04-16 20:28:48 -04:00
chhylp123 ebfc04d253 clean purge_dups 2021-04-03 16:26:58 -04:00